6WF1 Viral Protein Immune System date Apr 03, 2020
title Crystal Structure Of Broadly Neutralizing Antibody 3i14 Boun Influenza A H10 Hemagglutinin
authors W.D.Harshbarger, G.J.Lockbaum, D.T.Deming, N.Attatippaholkun, C.A.Schiffer, W.A.Marasco
compound source
Molecule: Hemagglutinin
Chain: A
Engineered: Yes
 Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Hemagglutinin Ha2 Chain
Chain: B
Engineered: Yes
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Heavy Chain
Chain: H
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Light Chain
Chain: L
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 3 2 1
R_factor 0.261 R_Free 0.309
crystal
cell
length a length b length c angle alpha angle beta angle gamma
127.021 127.021 158.370 90.00 90.00 120.00
method X-Ray Diffractionresolution 4.19 Å
ligand NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (6wf1.pdb1.gz) 418 Kb
  • LPC: Ligand-Protein Contacts for 6WF1
  • CSU: Contacts of Structural Units for 6WF1
  • Structure Factors (280 Kb)
  • Retrieve 6WF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WF1 from S2C, [Save to disk]
    • View 6WF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6WF1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wf1_L] [6wf1_B] [6wf1_A] [6wf1_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6WF1
  • Community annotation for 6WF1 at PDBWiki (http://pdbwiki.org)

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