6WHA Membrane Protein Immune System date Apr 07, 2020
title Htr2a Bound To 25-Cn-Nboh In Complex With A Mini-Galpha-Q Pr Betagamma Subunits And An Active-State Stabilizing Single- Variable Fragment (Scfv16) Obtained By Cryo-Electron Micros (Cryoem)
authors G.Skiniotis, B.Roth, K.Kim, O.Panova
compound source
Molecule: Soluble Cytochrome B562,5-Hydroxytryptamine Recep Chimera;
Chain: A
Fragment: Cybc (Unp Residues 23-127) + Linker + Htr2a (Unp 66-404);
Synonym: Cytochrome B-562,5-Ht-2a,Serotonin Receptor 2a
Engineered: Yes
Organism_scientific: Escherichia Coli, Homo Sapiens
Organism_common: Human
Organism_taxid: 562, 9606
Gene: Cybc, Htr2a, Htr2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: G Subunit Q (Gi2-Mini-Gq Chimeric)
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(T) Beta-1;
Chain: C
Synonym: Transducin Beta Chain 1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gnb1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(O) Gamma-2;
Chain: D
Synonym: G Gamma-I
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gng2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Single Fab Chain (Svfv16)
Chain: E
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.36 Å
ligand U0G enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


C
  • G-protein coupled acetylchol...

  • D


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (6wha.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 6WHA
  • CSU: Contacts of Structural Units for 6WHA
  • Retrieve 6WHA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WHA from S2C, [Save to disk]
  • View 6WHA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6WHA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wha_B] [6wha_D] [6wha_C] [6wha_A] [6wha_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6WHA
  • Community annotation for 6WHA at PDBWiki (http://pdbwiki.org)

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