6WLS Rna date Apr 20, 2020
title Tetrahymena Ribozyme Models, 6.8 Angstrom Resolution
authors K.Kappel, K.Zhang, Z.Su, A.M.Watkins, W.Kladwang, S.Li, G.Pintilie V.V.Topkar, R.Rangan, I.N.Zheludev, J.D.Yesselman, W.Chiu, R.Das
compound source
Molecule: Rna (388-Mer)
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Tetrahymena Thermophila
Organism_taxid: 5911
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.80 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (4145 Kb) [Save to disk]
  • Biological Unit Coordinates (6wls.pdb1.gz) 208 Kb
  • CSU: Contacts of Structural Units for 6WLS
  • Retrieve 6WLS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WLS from S2C, [Save to disk]
  • View 6WLS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6WLS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6wls from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wls_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6WLS
  • Community annotation for 6WLS at PDBWiki (http://pdbwiki.org)

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