6WO0 Dna Binding Protein date Apr 23, 2020
title Human Artemissnm1c Catalytic Domain, Crystal Form 1
authors F.Karim, S.Liu, A.R.Laciak, L.Volk, M.Rosenblum, R.Curtis, N.Huang G.Zhu
compound source
Molecule: Protein Artemis
Chain: A
Synonym: Dna Cross-Link Repair 1c Protein,Protein A-Scid,Sn C,Hsnm1c,Snm1-Like Protein;
Ec: 3.1.-.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dclre1c, Artemis, Ascid, Scida, Snm1c
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 2
R_factor 0.218 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.690 111.010 55.160 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand GOL, ZN enzyme Hydrolase E.C.3.1 BRENDA
Primary referenceStructural analysis of the catalytic domain of Artemis endonuclease/SNM1C reveals distinct structural features., Karim MF, Liu S, Laciak AR, Volk L, Rosenblum M, Lieber MR, Wu M, Curtis R, Huang N, Carr G, Zhu G, J Biol Chem. 2020 Jun 23. pii: RA120.014136. doi: 10.1074/jbc.RA120.014136. PMID:32576658
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (6wo0.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 6WO0
  • CSU: Contacts of Structural Units for 6WO0
  • Structure Factors (855 Kb)
  • Retrieve 6WO0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WO0 from S2C, [Save to disk]
  • View 6WO0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6WO0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wo0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6WO0
  • Community annotation for 6WO0 at PDBWiki (http://pdbwiki.org)

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