6WQZ Membrane Protein date Apr 29, 2020
title Structure Of Human Atg9a, The Only Transmembrane Protein Of Autophagy Machinery
authors C.M.Guardia, X.Tan, T.Lian, M.S.Rana, W.Zhou, E.T.Christenson, A.J J.D.Faraldo-Gomez, J.S.Bonifacino, J.Jiang, A.Banerjee
compound source
Molecule: Autophagy-Related Protein 9a
Chain: C, F, B, A, E, D
Synonym: Apg9-Like 1,Matg9
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atg9a, Apg9l1
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293t
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.80 Å
ligand LMN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (6wqz.pdb1.gz) 250 Kb
  • LPC: Ligand-Protein Contacts for 6WQZ
  • CSU: Contacts of Structural Units for 6WQZ
  • Retrieve 6WQZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WQZ from S2C, [Save to disk]
    • View 6WQZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6WQZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wqz_B] [6wqz_F] [6wqz_C] [6wqz_A] [6wqz_D] [6wqz_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6WQZ
  • Community annotation for 6WQZ at PDBWiki (http://pdbwiki.org)

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