6WTJ Hydrolase Hydrolase Inhibitor date May 02, 2020
title Feline Coronavirus Drug Inhibits The Main Protease Of Sars-C Blocks Virus Replication
authors M.B.Khan, E.Arutyunova, H.S.Young, M.J.Lemieux
compound source
Molecule: 3c-Like Proteinase
Chain: A
Synonym: 3cl-Pro, 3clp
Ec: 3.4.22.69
Engineered: Yes
 Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov
Organism_taxid: 2697049
Gene: Rep, 1a-1b
Expression_system: Escherichia Coli O103:H2 Str. 12009
Expression_system_taxid: 585395
symmetry Space Group: C 1 2 1
R_factor 0.199 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.970 53.810 45.500 90.00 101.74 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand K36 enzyme Hydrolase E.C.3.4.22.69 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFeline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication., Vuong W, Khan MB, Fischer C, Arutyunova E, Lamer T, Shields J, Saffran HA, McKay RT, van Belkum MJ, Joyce MA, Young HS, Tyrrell DL, Vederas JC, Lemieux MJ, Nat Commun. 2020 Aug 27;11(1):4282. doi: 10.1038/s41467-020-18096-2. PMID:32855413
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (6wtj.pdb1.gz) 202 Kb
  • LPC: Ligand-Protein Contacts for 6WTJ
  • CSU: Contacts of Structural Units for 6WTJ
  • Structure Factors (658 Kb)
  • Retrieve 6WTJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WTJ from S2C, [Save to disk]
    • View 6WTJ in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6WTJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wtj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6WTJ
  • Community annotation for 6WTJ at PDBWiki (http://pdbwiki.org)

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