6WZ7 Metal Binding Protein date May 13, 2020
title Mn-Bound Structure Of A Tricyt3 Variant
authors F.A.Tezcan, A.Kakkis
compound source
Molecule: Soluble Cytochrome B562
Chain: A, B, C
Synonym: Cytochrome B-562
Engineered: Yes
Mutation: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Cybc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.180 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.978 81.847 53.385 90.00 90.04 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CA, CL, HEC, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceMetal-Templated Design of Chemically Switchable Protein Assemblies with High-Affinity Coordination Sites., Tezcan FA, Kakkis A, Gagnon D, Esselborn J, Britt RD, Angew Chem Int Ed Engl. 2020 Aug 23. doi: 10.1002/anie.202009226. PMID:32830423
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (6wz7.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 6WZ7
  • CSU: Contacts of Structural Units for 6WZ7
  • Structure Factors (711 Kb)
  • Retrieve 6WZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WZ7 from S2C, [Save to disk]
    • View 6WZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6WZ7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wz7_C] [6wz7_A] [6wz7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6WZ7
  • Community annotation for 6WZ7 at PDBWiki (http://pdbwiki.org)

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