6XBY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP, MG, NAG, POV	enzyme
Gene Ontology	Chain Function Process Component C, B, A proton-transporting ATP synt... F, E, D G H ATPase activity, coupled to ... proton-transporting ATPase a... K, J, I L O, N, M P a b c, o, q, n, p, k, m, l, g d
Primary reference	Cryo-EM structures of intact V-ATPase from bovine brain., Wang R, Long T, Hassan A, Wang J, Sun Y, Xie XS, Li X, Nat Commun. 2020 Aug 6;11(1):3921. doi: 10.1038/s41467-020-17762-9. PMID:32764564

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1052 Kb) [Save to disk] Biological Unit Coordinates (6xby.pdb1.gz) 1032 Kb LPC: Ligand-Protein Contacts for 6XBY CSU: Contacts of Structural Units for 6XBY Retrieve 6XBY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6XBY from S2C, [Save to disk]

View 6XBY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6xby_A] [6xby_B] [6xby_C] [6xby_D] [6xby_E] [6xby_F] [6xby_G] [6xby_H] [6xby_I] [6xby_J] [6xby_K] [6xby_L] [6xby_M] [6xby_N] [6xby_O] [6xby_P] [6xby_a] [6xby_b] [6xby_c] [6xby_d] [6xby_g] [6xby_k] [6xby_l] [6xby_m] [6xby_n] [6xby_o] [6xby_p] [6xby_q] [6xby_r] [6xby_s] SWISS-PROT database:

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