6XL6 Transcription date Jun 28, 2020
title Cryo-Em Structure Of Ecmrr-Dna Complex In Ecmrr-Rpo
authors Y.Yang, C.Liu, B.Liu
compound source
Molecule: Synthetic Non-Template Strand Dna (54-Mer)
Chain: N
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562

Molecule: Synthetic Template Strand Dna (54-Mer)
Chain: T
Engineered: Yes
Synthetic: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562

Molecule: Merr Family Transcriptional Regulator Ecmrr
Chain: G, H
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.00 Å
ligand 118, 1N7 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (6xl6.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 6XL6
  • CSU: Contacts of Structural Units for 6XL6
  • Retrieve 6XL6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6XL6 from S2C, [Save to disk]
    • View 6XL6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6XL6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6xl6_G] [6xl6_H] [6xl6_N] [6xl6_T]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6XL6
  • Community annotation for 6XL6 at PDBWiki (http://pdbwiki.org)

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