6XRA Distinct conformational states of SARS-CoV-2 spike protein date
authors Zhang, J., Cai, Y.F., Xiao, T.S., Peng, H.Q., Sterling, S.M., Jr, R.M.Walsh., Rawson, S., Rits-Volloch, S., Chen, B.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand MAN, NAG enzyme
Primary referenceDistinct conformational states of SARS-CoV-2 spike protein., Cai Y, Zhang J, Xiao T, Peng H, Sterling SM, Walsh RM Jr, Rawson S, Rits-Volloch S, Chen B, Science. 2020 Jul 21. pii: science.abd4251. doi: 10.1126/science.abd4251. PMID:32694201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (6xra.pdb1.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 6XRA
  • CSU: Contacts of Structural Units for 6XRA
  • Retrieve 6XRA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6XRA from S2C, [Save to disk]
  • View 6XRA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6XRA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6xra_A] [6xra_C] [6xra_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6XRA
  • Community annotation for 6XRA at PDBWiki (http://pdbwiki.org)

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