6YOV		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	PTD	enzyme
Gene Ontology	Chain Function Process Component B, F C, G E, A H, D K DNA binding
Primary reference	Mechanisms of OCT4-SOX2 motif readout on nucleosomes., Michael AK, Grand RS, Isbel L, Cavadini S, Kozicka Z, Kempf G, Bunker RD, Schenk AD, Graff-Meyer A, Pathare GR, Weiss J, Matsumoto S, Burger L, Schubeler D, Thoma NH, Science. 2020 Apr 23. pii: science.abb0074. doi: 10.1126/science.abb0074. PMID:32327602

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (253 Kb) [Save to disk] Biological Unit Coordinates (6yov.pdb1.gz) 242 Kb LPC: Ligand-Protein Contacts for 6YOV CSU: Contacts of Structural Units for 6YOV Retrieve 6YOV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6YOV from S2C, [Save to disk]

View 6YOV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6yov_A] [6yov_B] [6yov_C] [6yov_D] [6yov_E] [6yov_F] [6yov_G] [6yov_H] [6yov_I] [6yov_J] [6yov_K] [6yov_L] SWISS-PROT database:

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