6YSA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CIT, NAG, SNN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, E, H, C, L, J, D, I, G, A, F, K


Primary referenceStructural and functional studies of Arabidopsis thaliana legumain beta reveal isoform specific mechanisms of activation and substrate recognition., Dall E, Zauner FB, Soh WT, Demir F, Dahms SO, Cabrele C, Huesgen PF, Brandstetter H, J Biol Chem. 2020 Jul 21. pii: RA120.014478. doi: 10.1074/jbc.RA120.014478. PMID:32719006
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1542 Kb) [Save to disk]
  • Biological Unit Coordinates (6ysa.pdb1.gz) 135 Kb
  • Biological Unit Coordinates (6ysa.pdb2.gz) 135 Kb
  • Biological Unit Coordinates (6ysa.pdb3.gz) 136 Kb
  • Biological Unit Coordinates (6ysa.pdb4.gz) 137 Kb
  • Biological Unit Coordinates (6ysa.pdb5.gz) 136 Kb
  • Biological Unit Coordinates (6ysa.pdb6.gz) 136 Kb
  • Biological Unit Coordinates (6ysa.pdb7.gz) 135 Kb
  • Biological Unit Coordinates (6ysa.pdb8.gz) 136 Kb
  • Biological Unit Coordinates (6ysa.pdb9.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 6YSA
  • CSU: Contacts of Structural Units for 6YSA
  • Structure Factors (13182 Kb)
  • Retrieve 6YSA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YSA from S2C, [Save to disk]
    • View 6YSA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ysa_A] [6ysa_B] [6ysa_C] [6ysa_D] [6ysa_E] [6ysa_F] [6ysa_G] [6ysa_H] [6ysa_I] [6ysa_J] [6ysa_K] [6ysa_L]
  • SWISS-PROT database:

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