6Z0G Membrane Protein date May 08, 2020
title Structure Of Trem2 Transmembrane Helix In Dpc Micelles
authors A.Steiner, K.Schlepkow, B.Brunner, H.Steiner, C.Haass, F.Hagn
compound source
Molecule: Triggering Receptor Expressed On Myeloid Cells 2
Chain: A
Synonym: Trem-2,Triggering Receptor Expressed On Monocytes
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trem2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referencegamma-Secretase cleavage of the Alzheimer risk factor TREM2 is determined by its intrinsic structural dynamics., Steiner A, Schlepckow K, Brunner B, Steiner H, Haass C, Hagn F, EMBO J. 2020 Aug 24:e104247. doi: 10.15252/embj.2019104247. PMID:32830336
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (6z0g.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 6Z0G
  • Original NMR restraints for 6Z0G from PDB
  • Retrieve 6Z0G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Z0G from S2C, [Save to disk]
  • View 6Z0G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6Z0G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6z0g_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6Z0G
  • Community annotation for 6Z0G at PDBWiki (http://pdbwiki.org)

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