6Z0H Membrane Protein date May 08, 2020
title Structure Of Trem2 Transmembrane Helix K186a Variant In Dpc
authors A.Steiner, K.Schlepkow, B.Brunner, H.Steiner, C.Haass, F.Hagn
compound source
Molecule: Triggering Receptor Expressed On Myeloid Cells 2
Chain: A
Synonym: Trem-2,Triggering Receptor Expressed On Monocytes
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trem2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referencegamma-Secretase cleavage of the Alzheimer risk factor TREM2 is determined by its intrinsic structural dynamics., Steiner A, Schlepckow K, Brunner B, Steiner H, Haass C, Hagn F, EMBO J. 2020 Aug 24:e104247. doi: 10.15252/embj.2019104247. PMID:32830336
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (235 Kb) [Save to disk]
  • Biological Unit Coordinates (6z0h.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 6Z0H
  • Original NMR restraints for 6Z0H from PDB
  • Retrieve 6Z0H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Z0H from S2C, [Save to disk]
  • View 6Z0H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6Z0H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6z0h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6Z0H
  • Community annotation for 6Z0H at PDBWiki (http://pdbwiki.org)

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