6Z81 Rna Binding Protein date Jun 02, 2020
title Tsabd Bound To The Inhibitor
authors S.Missoury, H.Van Tilbeurgh
compound source
Molecule: Trna N6-Adenosine Threonylcarbamoyltransferase
Chain: A, B
Synonym: Ygjd,N6-L-Threonylcarbamoyladenine Synthase,T(6)A T(6)A37 Threonylcarbamoyladenosine Biosynthesis Protein Tsa Threonylcarbamoyladenosine Biosynthesis Protein Tsad;
Ec: 2.3.1.234
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Tsad, Gcp, Ygjd, B3064, Jw3036
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768

Molecule: Trna Threonylcarbamoyladenosine Biosynthesis Prot
Chain: C, D
Synonym: Yeaz,T(6)A37 Threonylcarbamoyladenosine Biosynthes Tsab;
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Tsab, Yeaz, B1807, Jw1796
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1
R_factor 0.182 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.230 69.250 86.540 109.38 92.00 116.94
method X-Ray Diffractionresolution 2.31 Å
ligand ACT, AMP, NA, NI, PEG, QCB, SO4, ZN enzyme Transferase E.C.2.3.1.234 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (6z81.pdb1.gz) 91 Kb
  • Biological Unit Coordinates (6z81.pdb2.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 6Z81
  • CSU: Contacts of Structural Units for 6Z81
  • Structure Factors (535 Kb)
  • Retrieve 6Z81 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Z81 from S2C, [Save to disk]
    • View 6Z81 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6Z81
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6z81_C] [6z81_D] [6z81_A] [6z81_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6Z81
  • Community annotation for 6Z81 at PDBWiki (http://pdbwiki.org)

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