6ZHA	Dna Binding Protein	date	Jun 21, 2020
title	Cryo-Em Structure Of Dna-Pk Monomer
authors	A.K.Chaplin, S.W.Hardwick, D.Y.Chirgadze, T.L.Blundell
compound		source
Molecule: Dna-Dependent Protein Kinase Catalytic Subunit,Dn Dependent Protein Kinase Catalytic Subunit,Dna-Dependent Pr Kinase Catalytic Subunit,Dna-Pkcs; Chain: A Synonym: Dna-Pkcs,Dnpk1,P460 Ec: 2.7.11.1,2.7.11.1,2.7.11.1		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: Hela
Molecule: X-Ray Repair Cross-Complementing Protein 6 Chain: B Synonym: 5'-Deoxyribose-5-Phosphate Lyase Ku70,5'-Drp Lyase Kda Subunit Of Ku Antigen,Atp-Dependent Dna Helicase 2 Subu Dependent Dna Helicase II 70 Kda Subunit,Ctc Box-Binding Fa Kda Subunit,Ctcbf,Dna Repair Protein Xrcc6,Lupus Ku Autoant Protein P70,Ku70,Thyroid-Lupus Autoantigen,Tlaa,X-Ray Repai Complementing Defective Repair In Chinese Hamster Cells 6; Ec: 3.6.4.-,4.2.99.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Xrcc6, G22p1 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: X-Ray Repair Cross-Complementing Protein 5 Chain: C Synonym: 86 Kda Subunit Of Ku Antigen,Atp-Dependent Dna Hel Subunit 2,Atp-Dependent Dna Helicase II 80 Kda Subunit,Ctc Binding Factor 85 Kda Subunit,Ctcbf,Dna Repair Protein Xrcc Ku86,Lupus Ku Autoantigen Protein P86,Nuclear Factor Iv,Thy Autoantigen,Tlaa,X-Ray Repair Complementing Defective Repai Chinese Hamster Cells 5 (Double-Strand-Break Rejoining); Ec: 3.6.4.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Xrcc5, G22p2 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: Dna Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Dna Chain: E Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.91 Å
ligand		enzyme	Transferase E.C.2.7.11.1 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (701 Kb) [Save to disk] Biological Unit Coordinates (6zha.pdb1.gz) 682 Kb CSU: Contacts of Structural Units for 6ZHA Retrieve 6ZHA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6ZHA from S2C, [Save to disk]

View 6ZHA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6ZHA

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6zha_B] [6zha_A] [6zha_C] [6zha_D] [6zha_E] SWISS-PROT database: Domain organization of by SWISSPFAM

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