6ZL7 Hydrolase date Jun 30, 2020
title Crystal Structure Of C173s Mutation In The Pmgl2 Esterase Fr Permafrost Metagenomic Library
authors D.A.Goryaynova, K.M.Boyko, A.Y.Nikolaeva, D.A.Korzhenevskiy, M.V.Kryukova, L.E.Petrovskaya, K.A.Novototskaya-Vlasova, E.M.R D.A.Dolgikh, M.P.Kirpichnikov, V.O.Popov
compound source
Molecule: Pmgl2
Chain: A, B
Ec: 3.1.1.3
Engineered: Yes
Mutation: Yes
Organism_scientific: Uncultured Bacterium
Organism_taxid: 77133
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.169 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.149 92.530 74.410 90.00 106.61 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand MG, PG6 enzyme Hydrolase E.C.3.1.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (6zl7.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 6ZL7
  • CSU: Contacts of Structural Units for 6ZL7
  • Structure Factors (3947 Kb)
  • Retrieve 6ZL7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ZL7 from S2C, [Save to disk]
  • View 6ZL7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ZL7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6zl7_B] [6zl7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ZL7
  • Community annotation for 6ZL7 at PDBWiki (http://pdbwiki.org)

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