6ZOV Hydrolase date Jul 07, 2020
title Enteropeptidase In Complex With Compound 6
authors M.D.Cummings
compound source
Molecule: Enteropeptidase
Chain: A, B, C, D
Fragment: Catalytic Domain
Synonym: Enterokinase,Serine Protease 7,Transmembrane Prote 15;
Ec: 3.4.21.9
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tmprss15, Entk, Prss7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.226 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.925 147.517 147.518 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.19 Å
ligand EDO, GBS, GOL, PGE enzyme Hydrolase E.C.3.4.21.9 BRENDA
Primary referenceTargeting enteropeptidase with reversible covalent inhibitors to achieve metabolic benefits., Sun W, Zhang X, Cummings MD, Albarazanji K, Wu J, Wang M, Alexander R, Zhu B, Zhang Y, Leonard J, Lanter J, Lenhard J, J Pharmacol Exp Ther. 2020 Oct 8. pii: jpet.120.000219. doi:, 10.1124/jpet.120.000219. PMID:33033171
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (328 Kb) [Save to disk]
  • Biological Unit Coordinates (6zov.pdb1.gz) 81 Kb
  • Biological Unit Coordinates (6zov.pdb2.gz) 82 Kb
  • Biological Unit Coordinates (6zov.pdb3.gz) 79 Kb
  • Biological Unit Coordinates (6zov.pdb4.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 6ZOV
  • CSU: Contacts of Structural Units for 6ZOV
  • Structure Factors (1284 Kb)
  • Retrieve 6ZOV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ZOV from S2C, [Save to disk]
  • View 6ZOV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ZOV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6zov_A] [6zov_C] [6zov_B] [6zov_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ZOV
  • Community annotation for 6ZOV at PDBWiki (http://pdbwiki.org)

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