6ZSH Endocytosis date Jul 15, 2020
title The Mechanism Of Activation Of The Actin Binding Protein Ehb Family Members
authors A.Rai, N.Bleimling, I.R.Vetter, R.S.Goody
compound source
Molecule: Eh Domain-Binding Protein 1
Chain: A, C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ehbp1, Kiaa0903, Nacsin
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Eh Domain-Binding Protein 1
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ehbp1, Kiaa0903, Nacsin
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.177 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.060 48.190 100.300 90.00 97.48 90.00
method X-Ray Diffractionresolution 2.20 Å
Primary referenceThe mechanism of activation of the actin binding protein EHBP1 by Rab8 family members., Rai A, Bleimling N, Vetter IR, Goody RS, Nat Commun. 2020 Aug 21;11(1):4187. doi: 10.1038/s41467-020-17792-3. PMID:32826901
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (6zsh.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (6zsh.pdb2.gz) 33 Kb
  • CSU: Contacts of Structural Units for 6ZSH
  • Structure Factors (238 Kb)
  • Retrieve 6ZSH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ZSH from S2C, [Save to disk]
  • View 6ZSH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ZSH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6zsh_B] [6zsh_D] [6zsh_A] [6zsh_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ZSH
  • Community annotation for 6ZSH at PDBWiki (http://pdbwiki.org)

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