6C6G Hydrolase date Jan 18, 2018
title An Unexpected Vestigial Protein Complex Reveals The Evolutio Origins Of An S-Triazine Catabolic Enzyme. Inhibitor Bound
authors T.S.Peat, L.Esquirol, M.Wilding, J.W.Liu, N.G.French, C.J.Hartley O.Hideki, C.J.Easton, J.Newman, C.Scott
compound source
Molecule: Biuret Hydrolase
Chain: A, B
Ec: 3.5.1.84
Organism_scientific: Pseudomonas Sp. Adp
Organism_taxid: 47660
Strain: Adp

Molecule: Atzg
Chain: C, D

Organism_scientific: Pseudomonas Sp. Adp
Organism_taxid: 47660
Strain: Adp
symmetry Space Group: I 1 2 1
R_factor 0.166 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.629 88.909 141.852 90.00 101.32 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CA, SVV enzyme Hydrolase E.C.3.5.1.84 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Primary referenceAn unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme., Esquirol L, Peat TS, Wilding M, Liu JW, French NG, Hartley CJ, Onagi H, Nebl T, Easton CJ, Newman J, Scott C, J Biol Chem. 2018 Mar 9. pii: RA118.001996. doi: 10.1074/jbc.RA118.001996. PMID:29523689
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (6c6g.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 6C6G
  • CSU: Contacts of Structural Units for 6C6G
  • Structure Factors (1662 Kb)
  • Retrieve 6C6G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6C6G from S2C, [Save to disk]
  • View 6C6G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6C6G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6c6g_B] [6c6g_A] [6c6g_C] [6c6g_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6C6G
  • Community annotation for 6C6G at PDBWiki (http://pdbwiki.org)

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