6K4T Hydrolase date May 27, 2019
title Crystal Structure Of Smb-1 Metallo-Beta-Lactamase In A Compl Tsa
authors J.Wachino
compound source
Molecule: Metallo-Beta-Lactamase
Chain: A
Synonym: Metallo-Beta-Lactamase Type 2
Ec: 3.5.2.6
Engineered: Yes
Organism_scientific: Serratia Marcescens
Organism_taxid: 615
Gene: Smb-1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.147 R_Free 0.170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.040 41.590 45.550 108.60 102.75 106.06
method X-Ray Diffractionresolution 1.39 Å
ligand JKE, SO4, TRS, ZN enzyme Hydrolase E.C.3.5.2.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (6k4t.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 6K4T
  • CSU: Contacts of Structural Units for 6K4T
  • Structure Factors (2057 Kb)
  • Retrieve 6K4T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K4T from S2C, [Save to disk]
  • View 6K4T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6K4T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k4t_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6K4T
  • Community annotation for 6K4T at PDBWiki (http://pdbwiki.org)

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