6KK1 Signaling Protein date Jul 23, 2019
title Structure Of Thermal-Stabilised(M8) Human Glp-1 Receptor Tra Domain
authors G.Song
compound source
Molecule: Glucagon-Like Peptide 1 Receptor,Endolysin,Glucag Peptide 1 Receptor;
Chain: A, B
Synonym: Glp-1r,Lysis Protein,Lysozyme,Muramidase,Glp-1r
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens, Enterobacteria Phage T4
Organism_common: Human
Organism_taxid: 9606, 10665
Gene: Glp1r
Expression_system: Spodoptera Aff. Frugiperda 1 Bold-2017
Expression_system_taxid: 2449148
Expression_system_cell_line: Iplb-Sf-21-Ae
Expression_system_cell: Sf9
Expression_system_plasmid: Pfastbac
symmetry Space Group: P 1
R_factor 0.244 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.930 67.350 83.680 91.07 90.10 107.96
method X-Ray Diffractionresolution 2.80 Å
ligand 97Y enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk]
  • Biological Unit Coordinates (6kk1.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (6kk1.pdb2.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 6KK1
  • CSU: Contacts of Structural Units for 6KK1
  • Structure Factors (634 Kb)
  • Retrieve 6KK1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KK1 from S2C, [Save to disk]
    • View 6KK1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6KK1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kk1_A] [6kk1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6KK1
  • Community annotation for 6KK1 at PDBWiki (http://pdbwiki.org)

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