6SUL Antimicrobial Protein date Sep 15, 2019
title Amicoumacin Kinase Amin In Complex With Amp-Pnp, Mg2+ And Am
authors G.P.Bourenkov, Y.A.Mokrushina, S.S.Terekhov, I.V.Smirnov, A.G.Ga S.Altman
compound source
Molecule: Phosphotransferase Enzyme Family Protein, Amicoum Kinase;
Chain: A, B, C, D
Ec: 2.7.1.230
Engineered: Yes
 Organism_scientific: Bacillus Pumilus
Organism_taxid: 1408
Gene: C6x97_15155, Ejb14_06995
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.149 R_Free 0.188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.340 76.770 101.200 89.95 99.62 91.44
method X-Ray Diffractionresolution 1.35 Å
ligand ANP, CL, MG, UAM enzyme Transferase E.C.2.7.1.230 BRENDA
Primary referenceA kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding., Terekhov SS, Mokrushina YA, Nazarov AS, Zlobin A, Zalevsky A, Bourenkov G, Golovin A, Belogurov A Jr, Osterman IA, Kulikova AA, Mitkevich VA, Lou HJ, Turk BE, Wilmanns M, Smirnov IV, Altman S, Gabibov AG, Sci Adv. 2020 Jun 24;6(26):eaaz9861. doi: 10.1126/sciadv.aaz9861. eCollection, 2020 Jun. PMID:32637600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (525 Kb) [Save to disk]
  • Biological Unit Coordinates (6sul.pdb1.gz) 258 Kb
  • Biological Unit Coordinates (6sul.pdb2.gz) 264 Kb
  • LPC: Ligand-Protein Contacts for 6SUL
  • CSU: Contacts of Structural Units for 6SUL
  • Structure Factors (7714 Kb)
  • Retrieve 6SUL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SUL from S2C, [Save to disk]
    • View 6SUL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6SUL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6sul_C] [6sul_A] [6sul_B] [6sul_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6SUL
  • Community annotation for 6SUL at PDBWiki (http://pdbwiki.org)

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