6UR2	DNA polymerase I Large Fragment from Bacillus stearothermophilus with DNA template and primer containing an N3'-> P5' linkage	date
authors	Zhang, W., Lelyveld, V.S., Szostak, J.W.
compound		source
symmetry		R_factor R_Free 0.2767
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.27
ligand	C42	enzyme
Gene Ontology	Chain Function Process Component A DNA-directed DNA polymerase ... 3'-5' exonuclease activity
Primary reference	Synthesis of phosphoramidate-linked DNA by a modified DNA polymerase., Lelyveld VS, Zhang W, Szostak JW, Proc Natl Acad Sci U S A. 2020 Mar 31;117(13):7276-7283. doi:, 10.1073/pnas.1922400117. Epub 2020 Mar 18. PMID:32188786

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk] Biological Unit Coordinates (6ur2.pdb1.gz) 106 Kb LPC: Ligand-Protein Contacts for 6UR2 CSU: Contacts of Structural Units for 6UR2 Structure Factors (1147 Kb) Retrieve 6UR2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6UR2 from S2C, [Save to disk]

View 6UR2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6UR2

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6ur2 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ur2_C] [6ur2_A] [6ur2_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6UR2

Community annotation for 6UR2 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---