7A1G Ribosome date Aug 13, 2020
title Structure Of A Crosslinked Yeast Abce1-Bound 43s Pre-Initiat Complex
authors T.Mackens-Kiani, H.Kratzat, J.Cheng, O.Berninghausen, T.Becker, R
compound source
Molecule: 18s Ribosomal Rna
Chain: 2
 Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_taxid: 559292

Molecule: 40s Ribosomal Protein S0-A
Chain: P
Synonym: Nucleic Acid-Binding Protein Nab1a,Small Ribosomal Protein Us2-A;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S1-A
Chain: Q
Synonym: Rp10a,Small Ribosomal Subunit Protein Es1-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S2
Chain: R
Synonym: Omnipotent Suppressor Protein Sup44,Rp12,S4,Small Subunit Protein Us5,Ys5;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S4-A
Chain: S
Synonym: Rp5,S7,Small Ribosomal Subunit Protein Es4-A,Ys6
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S6-A
Chain: T
Synonym: Rp9,S10,Small Ribosomal Subunit Protein Es6-A,Ys4
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S7-A
Chain: U
Synonym: Rp30,Rp40,Small Ribosomal Subunit Protein Es7-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S8-A
Chain: V
Synonym: Rp19,S14,Small Ribosomal Subunit Protein Es8-A,Ys9
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S9-A
Chain: W
Synonym: Rp21,S13,Small Ribosomal Subunit Protein Us4-A,Yp2
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S11-A
Chain: X
Synonym: Rp41,S18,Small Ribosomal Subunit Protein Us17-A,Ys
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S13
Chain: Y
Synonym: S27a,Small Ribosomal Subunit Protein Us15,Ys15
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S14-B
Chain: Z
Synonym: Rp59b,Small Ribosomal Subunit Protein Us11-B
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S21-A
Chain: a
Synonym: S26,Small Ribosomal Subunit Protein Es21-A,Ys25
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S22-A
Chain: b
Synonym: Rp50,S24,Small Ribosomal Subunit Protein Us8-A,Yp5
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S23-A
Chain: c
Synonym: Rp37,S28,Small Ribosomal Subunit Protein Us12-A,Ys
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S24-A
Chain: d
Synonym: Rp50,Small Ribosomal Subunit Protein Es24-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S26-B
Chain: e
Synonym: Small Ribosomal Subunit Protein Es26-B
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S27-A
Chain: f
Synonym: Rp61,Small Ribosomal Subunit Protein Es27-A,Ys20
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S30-A
Chain: g
Synonym: Small Ribosomal Subunit Protein Es30-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S15
Chain: E
Synonym: Rig Protein,Rp52,S21,Small Ribosomal Subunit Prote Ys21;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S3
Chain: A
Synonym: Rp13,Small Ribosomal Subunit Protein Us3,Ys3
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S5
Chain: B
Synonym: Rp14,S2,Small Ribosomal Subunit Protein Us7,Ys8
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S10-A
Chain: C
Synonym: Small Ribosomal Subunit Protein Es10-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S12
Chain: D
Synonym: Small Ribosomal Subunit Protein Es12
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S16-A
Chain: F
Synonym: Rp61r,Small Ribosomal Subunit Protein Us9-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S17-B
Chain: H
Synonym: Rp51b,Small Ribosomal Subunit Protein Es17-B
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S18-A
Chain: I
Synonym: Small Ribosomal Subunit Protein Us13-A
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S19-A
Chain: J
Synonym: Rp55a,S16a,Small Ribosomal Subunit Protein Es19-A, Ys16a;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S20
Chain: K
Synonym: Small Ribosomal Subunit Protein Us10
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S25-A
Chain: L
Synonym: Rp45,S31,Small Ribosomal Subunit Protein Es25-A,Ys
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S29-A
Chain: M
Synonym: S36,Small Ribosomal Subunit Protein Us14-A,Ys29
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Ubiquitin-40s Ribosomal Protein S31
Chain: N
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Guanine Nucleotide-Binding Protein Subunit Beta-L Protein;
Chain: O
Synonym: Receptor For Activated C Kinase,Receptor Of Activa Protein Kinase C 1,Rack1,Small Ribosomal Subunit Protein Ra
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: 40s Ribosomal Protein S28-A
Chain: h
Synonym: S33,Small Ribosomal Subunit Protein Es28-A,Ys27
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Eukaryotic Translation Initiation Factor 3 Subuni
Chain: z, y
Synonym: Eif3j,Eukaryotic Translation Initiation Factor 3 3 Subunit,Eif-3 30 Kda;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Translation Initiation Factor Rli1
Chain: x
Synonym: Atp-Binding Cassette Sub-Family E Member Rli1,Rnas Inhibitor
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.00 Å
ligand ADP, MG, SF4, ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1414 Kb) [Save to disk]
  • Biological Unit Coordinates (7a1g.pdb1.gz) 1403 Kb
  • LPC: Ligand-Protein Contacts for 7A1G
  • CSU: Contacts of Structural Units for 7A1G
  • Retrieve 7A1G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7A1G from S2C, [Save to disk]
    • View 7A1G in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7A1G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7a1g_O] [7a1g_U] [7a1g_F] [7a1g_d] [7a1g_K] [7a1g_D] [7a1g_L] [7a1g_N] [7a1g_B] [7a1g_S] [7a1g_R] [7a1g_E] [7a1g_z] [7a1g_f] [7a1g_C] [7a1g_Y] [7a1g_P] [7a1g_h] [7a1g_H] [7a1g_X] [7a1g_c] [7a1g_x] [7a1g_g] [7a1g_2] [7a1g_J] [7a1g_b] [7a1g_I] [7a1g_T] [7a1g_a] [7a1g_Q] [7a1g_A] [7a1g_e] [7a1g_y] [7a1g_Z] [7a1g_V] [7a1g_W] [7a1g_M]
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  • Domain organization of by SWISSPFAM
    • Other resources with information on 7A1G
  • Community annotation for 7A1G at PDBWiki (http://pdbwiki.org)

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