7A6A Metal Binding Protein date Aug 25, 2020
title 1.15 A Structure Of Human Apoferritin Obtained From Titan Mo Microscope
authors K.M.Yip, N.Fischer, A.Chari, H.Stark
compound source
Molecule: Ferritin Heavy Chain
Chain: A, 1, K, a, B, E, e, r, G, I, M, O, Q, S, U, W, Y, 2 P, X, 6;
Synonym: Ferritin H Subunit,Cell Proliferation-Inducing Gen Protein;
Ec: 1.16.3.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fth1, Fth, Fthl6, Oksw-Cl.84, Pig15
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 1.15 Å
ligand CSX, NA enzyme Oxidoreductase E.C.1.16.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
S, F, r, a, K, Y, E, 2, Q, 1, M, e, 6, A, O, W, X, P, B, H, 4, I, G, U


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1665 Kb) [Save to disk]
  • Biological Unit Coordinates (7a6a.pdb1.gz) 1616 Kb
  • LPC: Ligand-Protein Contacts for 7A6A
  • CSU: Contacts of Structural Units for 7A6A
  • Retrieve 7A6A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7A6A from S2C, [Save to disk]
  • View 7A6A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7A6A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 7a6a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7a6a_S] [7a6a_a] [7a6a_H] [7a6a_A] [7a6a_U] [7a6a_X] [7a6a_e] [7a6a_O] [7a6a_W] [7a6a_6] [7a6a_F] [7a6a_E] [7a6a_Q] [7a6a_r] [7a6a_M] [7a6a_2] [7a6a_I] [7a6a_K] [7a6a_P] [7a6a_B] [7a6a_G] [7a6a_4] [7a6a_1] [7a6a_Y]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7A6A
  • Community annotation for 7A6A at PDBWiki (http://pdbwiki.org)

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