7A93 Viral Protein date Sep 01, 2020
title Sars-Cov-2 Spike Glycoprotein With 2 Rbds Erect
authors D.J.Benton, A.G.Wrobel, P.B.Rosenthal, S.J.Gamblin
compound source
Molecule: Spike Glycoprotein
Chain: A, B, C
Synonym: S Glycoprotein,E2,Peplomer Protein
Engineered: Yes
 Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov
Organism_taxid: 2697049
Gene: S, 2
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.90 Å
Primary referenceReceptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion., Benton DJ, Wrobel AG, Xu P, Roustan C, Martin SR, Rosenthal PB, Skehel JJ, Gamblin SJ, Nature. 2020 Sep 17. pii: 10.1038/s41586-020-2772-0. doi:, 10.1038/s41586-020-2772-0. PMID:32942285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (465 Kb) [Save to disk]
  • Biological Unit Coordinates (7a93.pdb1.gz) 452 Kb
  • CSU: Contacts of Structural Units for 7A93
  • Retrieve 7A93 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7A93 from S2C, [Save to disk]
    • View 7A93 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7A93
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7a93_C] [7a93_B] [7a93_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7A93
  • Community annotation for 7A93 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science