7AWR Peptide Binding Protein date Nov 09, 2020
title Structure Of Sars-Cov-2 Main Protease Bound To Tegafur
authors S.Guenther, P.Y.A.Reinke, D.Oberthuer, O.Yefanov, L.Gelisio, H.Gi J.Lieske, M.Domaracky, W.Brehm, A.Rahmani Mashour, T.A.White, J. G.Pena Esperanza, F.Koua, A.Tolstikova, M.Groessler, P.Fischer, V.Hennicke, H.Fleckenstein, F.Trost, M.Galchenkova, Y.Gevorkov, S.Awel, L.X.Paulraj, N.Ullah, S.Falke, B.Alves Franca, M.Schwinz H.Brognaro, N.Werner, M.Perbandt, H.Tidow, B.Seychell, T.Beck, S. J.J.Doyle, H.Giseler, D.Melo, T.J.Lane, I.Dunkel, A.Peck, S.Saoua J.Hakanpaeae, J.Meyer, H.Noei, P.Gribbon, B.Ellinger, M.Kuzikov, L.Zhang, C.Ehrt, J.Pletzer-Zelgert, J.Wollenhaupt, C.Feiler, M.W E.C.Schulz, P.Mehrabi, B.Norton-Baker, C.Schmidt, K.Lorenzen, R. H.Han, A.Chari, Y.Fernandez Garcia, D.Turk, R.Hilgenfeld, M.Rare A.Zaliani, H.N.Chapman, A.Pearson, C.Betzel, A.Meents
compound source
Molecule: 3c-Like Proteinase
Chain: A
Synonym: 3cl-Pro,3clp,Main Protease,Mpro,Non-Structural Pro Nsp5,Sars Coronavirus Main Proteinase;
Ec: 3.4.22.69
Engineered: Yes
Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov, Sars-Cov-2
Organism_taxid: 2697049
Gene: Rep, 1a-1b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.152 R_Free 0.192
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.915 52.973 44.763 90.00 102.94 90.00
method X-Ray Diffractionresolution 1.34 Å
ligand DMS, S7W enzyme Hydrolase E.C.3.4.22.69 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk]
  • Biological Unit Coordinates (7awr.pdb1.gz) 308 Kb
  • LPC: Ligand-Protein Contacts for 7AWR
  • CSU: Contacts of Structural Units for 7AWR
  • Structure Factors (1525 Kb)
  • Retrieve 7AWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7AWR from S2C, [Save to disk]
  • View 7AWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7AWR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7awr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7AWR
  • Community annotation for 7AWR at PDBWiki (http://pdbwiki.org)

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