7BN8 Hydrolase date Jan 21, 2021
title Notum Fragment_3 (4h,5h-Naphtho[1,2-B]Thiophene-2-Carboxylic
authors Y.Zhao, E.Y.Jones
compound source
Molecule: Palmitoleoyl-Protein Carboxylesterase Notum
Chain: A
Synonym: Hnotum
Ec: 3.1.1.98
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Notum, Oksw-Cl.30
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.200 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.440 72.426 79.347 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.78 Å
ligand NAG, SO4, U4T enzyme Hydrolase E.C.3.1.1.98 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (7bn8.pdb1.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 7BN8
  • CSU: Contacts of Structural Units for 7BN8
  • Structure Factors (1334 Kb)
  • Retrieve 7BN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7BN8 from S2C, [Save to disk]
  • View 7BN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7BN8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7bn8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7BN8
  • Community annotation for 7BN8 at PDBWiki (http://pdbwiki.org)

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