7CBY	Transcription	date	Jun 15, 2020
title	Structure Of Foxg1 Dna Binding Domain Bound To Dbe2 Dna Site
authors	S.Y.Dai, J.Li, Y.H.Chen
compound		source
Molecule: Dna (5'-D(Tpcptptpgptptptpapcpaptptp 3'); Chain: A Engineered: Yes Other_details: Sf File Contains Friedel Pairs.		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Dna (5'-D(Cpapapapaptpgptpapapapcpap 3'); Chain: B Engineered: Yes Other_details: Sf File Contains Friedel Pairs.		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Forkhead Box Protein G1 Chain: C Synonym: Brain Factor 1,Bf1,Brain Factor 2,Hbf-2,Forkhead B G1a,Forkhead Box Protein G1b,Forkhead Box Protein G1c,Forkh Related Protein Fkhl1,Hfk1,Forkhead-Related Protein Fkhl2,H Forkhead-Related Protein Fkhl3,Hfk3; Engineered: Yes Other_details: Sf File Contains Friedel Pairs.		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Foxg1, Fkh2, Fkhl1, Fkhl2, Fkhl3, Fkhl4, Foxg1a, Foxg Foxg1c; Expression_system: Escherichia Coli O103:H2 Str. 12009 Expression_system_taxid: 585395
symmetry	Space Group: P 21 21 21	R_factor 0.156 R_Free 0.182
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.126 61.446 73.594 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	PEG	enzyme
Primary reference	Structural basis for DNA recognition by FOXG1 and the characterization of disease-causing FOXG1 mutations., Dai S, Li J, Zhang H, Chen X, Guo M, Chen Z, Chen Y, J Mol Biol. 2020 Oct 12. pii: S0022-2836(20)30583-0. doi:, 10.1016/j.jmb.2020.10.007. PMID:33058871

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk] Biological Unit Coordinates (7cby.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 7CBY CSU: Contacts of Structural Units for 7CBY Structure Factors (670 Kb) Retrieve 7CBY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 7CBY from S2C, [Save to disk]

View 7CBY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 7CBY

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [7cby_A] [7cby_B] [7cby_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 7CBY

Community annotation for 7CBY at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---