7CY9 Hydrolase date Sep 03, 2020
title Crystal Structure Of A Biodegradable Plastic-Degrading Cutin Paraphoma Sp. B47-9 Solved By Getting The Phase From Anomal Scattering Of Uncovalently Coordinated Arsenic (Cacodylate)
authors K.Suzuki, M.Koitabashi
compound source
Molecule: Cutinase
Chain: A, B
Ec: 3.1.1.74
Organism_scientific: Paraphoma Sp. B47-9
Organism_taxid: 1804209
symmetry Space Group: P 1
R_factor 0.122 R_Free 0.166
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.886 43.517 51.724 103.78 92.42 101.49
method X-Ray Diffractionresolution 1.36 Å
ligand CAD, NA, PCA enzyme Hydrolase E.C.3.1.1.74 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (7cy9.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (7cy9.pdb2.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 7CY9
  • CSU: Contacts of Structural Units for 7CY9
  • Structure Factors (1819 Kb)
  • Retrieve 7CY9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7CY9 from S2C, [Save to disk]
  • View 7CY9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7CY9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7cy9_A] [7cy9_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7CY9
  • Community annotation for 7CY9 at PDBWiki (http://pdbwiki.org)

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