7I1B Cytokine date Jan 22, 1991
title High-Resolution Three-Dimensional Structure Of Interleukin-1 Solution By Three-And Four-Dimensional Nuclear Magnetic Res Spectroscopy
authors G.M.Clore, A.M.Gronenborn
compound source
Molecule: Interleukin-1 Beta
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
related structures by homologous chain: 6I1B
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution three-dimensional structure of interleukin 1 beta in solution by three- and four-dimensional nuclear magnetic resonance spectroscopy., Clore GM, Wingfield PT, Gronenborn AM, Biochemistry 1991 Mar 5;30(9):2315-23. PMID:2001363
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1490 Kb) [Save to disk]
  • Biological Unit Coordinates (7i1b.pdb1.gz) 47 Kb
  • CSU: Contacts of Structural Units for 7I1B
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 7I1B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7I1B from S2C, [Save to disk]
    • View 7I1B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7I1B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 7I1B, from MSDmotif at EBI
  • Genome occurence of 7I1B's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d7i1b__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7i1b_A] [7i1b]
  • SWISS-PROT database: [P01584]
  • Belongs to the interleukin 1 (il1) family according to TCDB.
  • Domain organization of [IL1B_HUMAN] by SWISSPFAM
  • Domain found in 7I1B: [IL1 ] by SMART
    • Other resources with information on 7I1B
  • Community annotation for 7I1B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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