7RFS Hydrolase Inhibitor date Jul 14, 2021
title Structure Of Sars-Cov-2 Main Protease In Complex With A Cova Inhibitor
authors S.E.Greasley, R.A.Ferre, W.Liu, A.E.Stewart
compound source
Molecule: 3c-Like Proteinase
Chain: A
Synonym: 3cl-Pro,3clp,Main Protease,Mpro,Non-Structural Pro Nsp5,Sars Coronavirus Main Proteinase;
Ec: 3.4.22.69
Engineered: Yes
 Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov, Sars-Cov-2
Organism_taxid: 2697049
Gene: Rep, 1a-1b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.215 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.200 53.030 45.680 90.00 102.52 90.00
method X-Ray Diffractionresolution 1.91 Å
ligand 4WI enzyme Hydrolase E.C.3.4.22.69 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (7rfs.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 7RFS
  • CSU: Contacts of Structural Units for 7RFS
  • Structure Factors (1091 Kb)
  • Retrieve 7RFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7RFS from S2C, [Save to disk]
    • View 7RFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7RFS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7rfs_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7RFS
  • Community annotation for 7RFS at PDBWiki (http://pdbwiki.org)

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