7VC5 Ligase Ligase Inhibitor date Sep 01, 2021
title Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) In Complex Inhibitor T35 And Febrifugine (Ff) At 1.61 A Resolution
authors Y.Manickam, N.Malhotra, A.Sharma
compound source
Molecule: Prolyl-Trna Synthetase (Prors)
Chain: A
Engineered: Yes
Organism_scientific: Toxoplasma Gondii
Organism_taxid: 5811
Gene: Tgrh88_057780
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.165 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.194 73.092 74.936 90.00 111.57 90.00
method X-Ray Diffractionresolution 1.61 Å
ligand 1TI, 9SF, CL, EDO, MES enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk]
  • Biological Unit Coordinates (7vc5.pdb1.gz) 346 Kb
  • LPC: Ligand-Protein Contacts for 7VC5
  • CSU: Contacts of Structural Units for 7VC5
  • Structure Factors (2841 Kb)
  • Retrieve 7VC5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7VC5 from S2C, [Save to disk]
  • View 7VC5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7VC5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7vc5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7VC5
  • Community annotation for 7VC5 at PDBWiki (http://pdbwiki.org)

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