7RK3 Transferase date Jul 21, 2021
title Crystal Structure Of Human N-Myristoyltransferase 1 Fragment 109-496) Bound To Diacylated Human Arf6 Octapeptide And Coe
authors M.K.Fenwick, H.Lin
compound source
Molecule: Glycylpeptide N-Tetradecanoyltransferase 1
Chain: A
Fragment: Unp Residues 29-416
Synonym: Myristoyl-Coa:Protein N-Myristoyltransferase 1,Typ Myristoyltransferase,Peptide N-Myristoyltransferase 1;
Ec: 2.3.1.97
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nmt1, Nmt
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Adp-Ribosylation Factor 6
Chain: B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arf6
Expression_system: Unidentified
Expression_system_taxid: 32644
symmetry Space Group: P 21 21 21
R_factor 0.159 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.984 76.046 106.342 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand 4PS, 6NA, MYR enzyme Transferase E.C.2.3.1.97 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (7rk3.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 7RK3
  • CSU: Contacts of Structural Units for 7RK3
  • Structure Factors (391 Kb)
  • Retrieve 7RK3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7RK3 from S2C, [Save to disk]
    • View 7RK3 in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7RK3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7rk3_A] [7rk3_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7RK3
  • Community annotation for 7RK3 at PDBWiki (http://pdbwiki.org)

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