8F4V Membrane Protein date Nov 11, 2022
title Alpha7 Nicotinic Acetylcholine Receptor Intracellular And Transmembrane Domains Bound To Ivermectin In A Desensitized
authors V.Bondarenko, Q.Chen, P.Tang
compound source
Molecule: Neuronal Acetylcholine Receptor Subunit Alpha-7
Chain: A, B, C, D, E
Fragment: Transmembrane Domain And Intracellular Domain Res 496;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Chrna7, Nachra7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta 2(De3) Plyss
Expression_system_cell: E. Coli
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptbsg1-Tmd+Icd
methodSolution NMR
ligand IVM enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (5154 Kb) [Save to disk]
  • Biological Unit Coordinates (8f4v.pdb1.gz) 345 Kb
  • LPC: Ligand-Protein Contacts for 8F4V
  • CSU: Contacts of Structural Units for 8F4V
  • Original NMR restraints for 8F4V from PDB
  • Retrieve 8F4V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 8F4V from S2C, [Save to disk]
  • View 8F4V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 8F4V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [8f4v_B] [8f4v_D] [8f4v_E] [8f4v_C] [8f4v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 8F4V
  • Community annotation for 8F4V at PDBWiki (http://pdbwiki.org)

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