966C	Matrix Metalloprotease	date	Aug 07, 1998
title	Crystal Structure Of Fibroblast Collagenase-1 Complexed To A Ether Sulphone Based Hydroxamic Acid
authors	B.Lovejoy, A.Welch, S.Carr, C.Luong, C.Broka, R.T.Hendricks, J.Cam K.Walker, R.Martin, H.Van Wart, M.F.Browner
compound		source
Molecule: Mmp-1 Chain: A Fragment: Catalytic Domain Synonym: Collagenase-1 Ec: 3.4.24.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Other_details: Cdna Construct
symmetry	Space Group: P 21 21 21	R_factor 0.218 R_Free 0.330
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.480 56.520 74.230 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CA, RS2, ZN	enzyme	Hydrolase E.C.3.4.24 BRENDA
related structures	by homologous chain: 1A85, 1QIA, 1SLM
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structures of MMP-1 and -13 reveal the structural basis for selectivity of collagenase inhibitors., Lovejoy B, Welch AR, Carr S, Luong C, Broka C, Hendricks RT, Campbell JA, Walker KA, Martin R, Van Wart H, Browner MF, Nat Struct Biol 1999 Mar;6(3):217-21. PMID:10074939

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (966c.pdb1.gz) 38 Kb LPC: Ligand-Protein Contacts for 966C CSU: Contacts of Structural Units for 966C Likely Quarternary Molecular Structure file(s) for 966C Retrieve 966C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 966C from S2C, [Save to disk]

View 966C in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 966C

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 966C, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d966c__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [966c] [966c_A] SWISS-PROT database: [P03956] Domain organization of [MMP1_HUMAN] by SWISSPFAM Domain found in 966C: [ZnMc ] by SMART

Other resources with information on 966C

Community annotation for 966C at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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