Structure based on 3upx

Ideal structure
Name: [2-amino-1-(piperidin-4-ylmethyl)-1h-benzimidazol-6-yl](phenyl)methanone
Formula: C20 H22 N4 O
Weight: 334.415
SMILES: "Nc1nc2ccc(cc2n1CC3CCNCC3)C(=O)c4ccccc4"
Spacial conformation based on PDB 3upx
RESIDUE   B6A     47
CONECT      CAM    4 CAK  CAX  H1   H2  
CONECT      CAK    4 CAM  NAQ  H3   H4  
CONECT      NAQ    3 CAK  CAL  H5  
CONECT      CAL    4 NAQ  CAN  H7   H8  
CONECT      CAN    4 CAL  CAX  H9   H10 
CONECT      CAX    4 CAM  CAN  CAO  H11 
CONECT      CAO    4 CAX  NAY  H12  H13 
CONECT      NAY    3 CAO  CAW  CAU 
CONECT      CAW    3 NAY  CAJ  CAV 
CONECT      CAJ    3 CAW  CAT  H14 
CONECT      CAU    3 NAY  NAA  NAP 
CONECT      NAA    3 CAU  H15  H16 
CONECT      NAP    2 CAU  CAV 
CONECT      CAV    3 CAW  NAP  CAI 
CONECT      CAI    3 CAV  CAH  H17 
CONECT      CAH    3 CAI  CAT  H18 
CONECT      CAT    3 CAJ  CAH  CAR 
CONECT      CAR    3 CAT  OAB  CAS 
CONECT      OAB    1 CAR 
CONECT      CAS    3 CAR  CAF  CAG 
CONECT      CAF    3 CAS  CAD  H19 
CONECT      CAD    3 CAF  CAC  H20 
CONECT      CAC    3 CAD  CAE  H21 
CONECT      CAE    3 CAC  CAG  H22 
CONECT      CAG    3 CAS  CAE  H23 
CONECT      H1     1 CAM 
CONECT      H2     1 CAM 
CONECT      H3     1 CAK 
CONECT      H4     1 CAK 
CONECT      H5     1 NAQ 
CONECT      H7     1 CAL 
CONECT      H8     1 CAL 
CONECT      H9     1 CAN 
CONECT      H10    1 CAN 
CONECT      H11    1 CAX 
CONECT      H12    1 CAO 
CONECT      H13    1 CAO 
CONECT      H14    1 CAJ 
CONECT      H15    1 NAA 
CONECT      H16    1 NAA 
CONECT      H17    1 CAI 
CONECT      H18    1 CAH 
CONECT      H19    1 CAF 
CONECT      H20    1 CAD 
CONECT      H21    1 CAC 
CONECT      H22    1 CAE 
CONECT      H23    1 CAG 
END   
HET    B6A             47
HETNAM     B6A [2-amino-1-(piperidin-4-ylmethyl)-1H-benzimidazol-6-yl]
HETNAM   2 B6A (phenyl)methanone
FORMUL      B6A    C20 H22 N4 O1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science