PDB Short entry for 3EHW HEADER HYDROLASE 15-SEP-08 3EHW TITLE HUMAN DUTPASE IN COMPLEX WITH ALPHA,BETA-IMIDO-DUTP AND MG2+: TITLE 2 VISUALIZATION OF THE FULL-LENGTH C-TERMINI IN ALL MONOMERS AND TITLE 3 SUGGESTION FOR AN ADDITIONAL METAL ION BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUTP PYROPHOSPHATASE; COMPND 3 CHAIN: A, B, C, X, Y, Z; COMPND 4 EC: 3.6.1.23; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DUT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS JELLY-ROLL, FULL-LENGTH C-TERMINAL ARM, ENZYME-LIGAND COMPLEX, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.TAKACS,O.BARABAS,B.G.VERTESSY REVDAT 5 30-AUG-23 3EHW 1 REMARK LINK REVDAT 4 07-MAR-12 3EHW 1 VERSN JRNL SOURCE REMARK REVDAT 3 06-JUL-11 3EHW 1 JRNL REVDAT 2 24-FEB-09 3EHW 1 VERSN REVDAT 1 30-SEP-08 3EHW 0 JRNL AUTH E.TAKACS,O.BARABAS,B.G.VERTESSY JRNL TITL HUMAN DUTPASE IN COMPLEX WITH ALPHA,BETA-IMIDO-DUTP AND JRNL TITL 2 MG2+: VISUALIZATION OF THE FULL-LENGTH C-TERMINI IN ALL JRNL TITL 3 MONOMERS AND SUGGESTION FOR AN ADDITIONAL METAL ION BINDING JRNL TITL 4 SITE JRNL REF TO BE PUBLISHED REF NOW ASSIGNED AS JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.D.MOL,J.M.HARRIS,E.M.MCINTOSH,J.A.TAINER REMARK 1 TITL HUMAN DUTP PYROPHOSPHATASE: URACIL RECOGNITION BY A BETA REMARK 1 TITL 2 HAIRPIN AND ACTIVE SITES FORMED BY THREE SEPARATE SUBUNITS. REMARK 1 REF STRUCTURE V. 4 1077 1996 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 8805593 REMARK 1 DOI 10.1016/S0969-2126(96)00114-1 REMARK 1 REFERENCE 2 REMARK 1 AUTH B.VARGA,O.BARABAS,J.KOVARI,J.TOTH,E.HUNYADI-GULYAS, REMARK 1 AUTH 2 E.KLEMENT,K.F.MEDZIHRADSZKY,F.TOLGYESI,J.FIDY,B.G.VERTESSY REMARK 1 TITL ACTIVE SITE CLOSURE FACILITATES JUXTAPOSITION OF REACTANT REMARK 1 TITL 2 ATOMS FOR INITIATION OF CATALYSIS BY HUMAN DUTPASE. REMARK 1 REF FEBS LETT. V. 581 4783 2007 REMARK 1 REFN ISSN 0014-5793 REMARK 1 PMID 17880943 REMARK 1 DOI 10.1016/J.FEBSLET.2007.09.005 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 66842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3574 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5060 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 247 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 176 REMARK 3 SOLVENT ATOMS : 731 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 26.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : 0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.07000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.299 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6678 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9069 ; 1.289 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 851 ; 6.439 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 283 ;30.116 ;22.933 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1032 ;13.382 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 53 ;17.146 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 969 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5096 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3386 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4585 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 902 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.016 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 57 ; 0.191 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.174 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4251 ; 0.875 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6640 ; 1.520 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2710 ; 3.446 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2421 ; 5.140 ;20.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 164 REMARK 3 RESIDUE RANGE : B 24 B 164 REMARK 3 RESIDUE RANGE : C 24 C 164 REMARK 3 ORIGIN FOR THE GROUP (A): -10.6739 -0.0387 32.4647 REMARK 3 T TENSOR REMARK 3 T11: -0.0422 T22: -0.0495 REMARK 3 T33: -0.0658 T12: -0.0056 REMARK 3 T13: -0.0028 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 1.2178 L22: 0.6834 REMARK 3 L33: 0.7577 L12: 0.3710 REMARK 3 L13: -0.1503 L23: -0.2031 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: -0.1530 S13: 0.0911 REMARK 3 S21: 0.0638 S22: -0.0198 S23: 0.0286 REMARK 3 S31: 0.0336 S32: -0.0150 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 24 X 164 REMARK 3 RESIDUE RANGE : Y 24 Y 164 REMARK 3 RESIDUE RANGE : Z 24 Z 164 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1799 12.5620 1.0126 REMARK 3 T TENSOR REMARK 3 T11: -0.0524 T22: -0.0552 REMARK 3 T33: -0.0406 T12: 0.0034 REMARK 3 T13: -0.0047 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.6136 L22: 0.5974 REMARK 3 L33: 0.8073 L12: -0.2207 REMARK 3 L13: -0.2341 L23: -0.1667 REMARK 3 S TENSOR REMARK 3 S11: 0.0194 S12: 0.0089 S13: -0.0482 REMARK 3 S21: -0.0456 S22: -0.0030 S23: -0.0076 REMARK 3 S31: -0.0118 S32: 0.0077 S33: -0.0163 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049343. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8031 REMARK 200 MONOCHROMATOR : SI [111], HORIZONTALLY FOCUSING REMARK 200 OPTICS : BENT, VERTICALLY FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70417 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 2.170 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.13 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Q5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES BUFFER, CONTAINING 20% PEG REMARK 280 3350 AND 200 MM SODIUM CHLORIDE, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.58000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, Y, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 CYS A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12 REMARK 465 SER A 13 REMARK 465 LYS A 14 REMARK 465 ARG A 15 REMARK 465 ALA A 16 REMARK 465 ARG A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 VAL A 21 REMARK 465 GLY A 22 REMARK 465 GLY A 23 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 CYS B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 THR B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 ILE B 10 REMARK 465 SER B 11 REMARK 465 PRO B 12 REMARK 465 SER B 13 REMARK 465 LYS B 14 REMARK 465 ARG B 15 REMARK 465 ALA B 16 REMARK 465 ARG B 17 REMARK 465 PRO B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 VAL B 21 REMARK 465 GLY B 22 REMARK 465 GLY B 23 REMARK 465 MET B 24 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 CYS C 3 REMARK 465 SER C 4 REMARK 465 GLU C 5 REMARK 465 GLU C 6 REMARK 465 THR C 7 REMARK 465 PRO C 8 REMARK 465 ALA C 9 REMARK 465 ILE C 10 REMARK 465 SER C 11 REMARK 465 PRO C 12 REMARK 465 SER C 13 REMARK 465 LYS C 14 REMARK 465 ARG C 15 REMARK 465 ALA C 16 REMARK 465 ARG C 17 REMARK 465 PRO C 18 REMARK 465 ALA C 19 REMARK 465 GLU C 20 REMARK 465 VAL C 21 REMARK 465 GLY C 22 REMARK 465 GLY C 23 REMARK 465 MET C 24 REMARK 465 MET X 1 REMARK 465 PRO X 2 REMARK 465 CYS X 3 REMARK 465 SER X 4 REMARK 465 GLU X 5 REMARK 465 GLU X 6 REMARK 465 THR X 7 REMARK 465 PRO X 8 REMARK 465 ALA X 9 REMARK 465 ILE X 10 REMARK 465 SER X 11 REMARK 465 PRO X 12 REMARK 465 SER X 13 REMARK 465 LYS X 14 REMARK 465 ARG X 15 REMARK 465 ALA X 16 REMARK 465 ARG X 17 REMARK 465 PRO X 18 REMARK 465 ALA X 19 REMARK 465 GLU X 20 REMARK 465 VAL X 21 REMARK 465 GLY X 22 REMARK 465 GLY X 23 REMARK 465 MET X 24 REMARK 465 MET Y 1 REMARK 465 PRO Y 2 REMARK 465 CYS Y 3 REMARK 465 SER Y 4 REMARK 465 GLU Y 5 REMARK 465 GLU Y 6 REMARK 465 THR Y 7 REMARK 465 PRO Y 8 REMARK 465 ALA Y 9 REMARK 465 ILE Y 10 REMARK 465 SER Y 11 REMARK 465 PRO Y 12 REMARK 465 SER Y 13 REMARK 465 LYS Y 14 REMARK 465 ARG Y 15 REMARK 465 ALA Y 16 REMARK 465 ARG Y 17 REMARK 465 PRO Y 18 REMARK 465 ALA Y 19 REMARK 465 GLU Y 20 REMARK 465 VAL Y 21 REMARK 465 GLY Y 22 REMARK 465 GLY Y 23 REMARK 465 MET Y 24 REMARK 465 MET Z 1 REMARK 465 PRO Z 2 REMARK 465 CYS Z 3 REMARK 465 SER Z 4 REMARK 465 GLU Z 5 REMARK 465 GLU Z 6 REMARK 465 THR Z 7 REMARK 465 PRO Z 8 REMARK 465 ALA Z 9 REMARK 465 ILE Z 10 REMARK 465 SER Z 11 REMARK 465 PRO Z 12 REMARK 465 SER Z 13 REMARK 465 LYS Z 14 REMARK 465 ARG Z 15 REMARK 465 ALA Z 16 REMARK 465 ARG Z 17 REMARK 465 PRO Z 18 REMARK 465 ALA Z 19 REMARK 465 GLU Z 20 REMARK 465 VAL Z 21 REMARK 465 GLY Z 22 REMARK 465 GLY Z 23 REMARK 465 MET Z 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 25 CG CD OE1 NE2 REMARK 470 ARG A 27 NE CZ NH1 NH2 REMARK 470 MET A 61 CE REMARK 470 GLU A 62 OE1 OE2 REMARK 470 LYS A 118 CG CD CE NZ REMARK 470 LYS A 124 CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 ASP A 150 OD1 OD2 REMARK 470 ARG B 27 CD NE CZ NH1 NH2 REMARK 470 ARG B 30 NH1 NH2 REMARK 470 LYS B 124 NZ REMARK 470 GLN B 146 CG CD OE1 NE2 REMARK 470 ARG C 27 CZ NH1 NH2 REMARK 470 GLU C 33 CG CD OE1 OE2 REMARK 470 LYS C 118 NZ REMARK 470 GLU C 141 OE1 OE2 REMARK 470 GLU C 143 CD OE1 OE2 REMARK 470 GLN C 146 CG CD OE1 NE2 REMARK 470 ASP C 150 CG OD1 OD2 REMARK 470 LYS C 163 NZ REMARK 470 GLN X 25 OE1 NE2 REMARK 470 ARG X 27 CZ NH1 NH2 REMARK 470 LYS X 67 NZ REMARK 470 LYS X 125 CE NZ REMARK 470 GLU X 143 CD OE1 OE2 REMARK 470 GLN X 146 CD OE1 NE2 REMARK 470 LYS X 163 CD CE NZ REMARK 470 GLN Y 25 OE1 NE2 REMARK 470 ARG Y 27 NE CZ NH1 NH2 REMARK 470 GLU Y 33 CD OE1 OE2 REMARK 470 ARG Y 40 CZ NH1 NH2 REMARK 470 LYS Y 118 CD CE NZ REMARK 470 LYS Y 120 CE NZ REMARK 470 GLU Y 143 CG CD OE1 OE2 REMARK 470 LYS Y 163 CD CE NZ REMARK 470 ARG Z 27 CZ NH1 NH2 REMARK 470 GLU Z 33 CD OE1 OE2 REMARK 470 LYS Z 67 NZ REMARK 470 LYS Z 91 NZ REMARK 470 LYS Z 118 CD CE NZ REMARK 470 GLU Z 141 CD OE1 OE2 REMARK 470 GLN Z 146 CG CD OE1 NE2 REMARK 470 ASP Z 150 OD1 OD2 REMARK 470 LYS Z 163 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 98 -122.87 48.79 REMARK 500 TYR A 139 71.29 -118.29 REMARK 500 ALA B 98 -123.22 56.76 REMARK 500 TYR B 139 74.89 -109.97 REMARK 500 ALA C 98 -120.86 45.31 REMARK 500 TYR C 139 78.80 -114.42 REMARK 500 ALA X 98 -120.71 50.23 REMARK 500 TYR X 139 75.76 -113.79 REMARK 500 ALA Y 98 -122.03 51.79 REMARK 500 TYR Y 139 73.08 -115.26 REMARK 500 ALA Z 98 -122.92 54.38 REMARK 500 ALA Z 130 -177.97 -171.17 REMARK 500 TYR Z 139 74.23 -115.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 778 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 95 OD1 REMARK 620 2 HOH A 839 O 98.7 REMARK 620 3 HOH A 852 O 71.2 55.3 REMARK 620 4 ASP B 95 OD1 113.3 97.4 152.3 REMARK 620 5 HOH B 803 O 67.6 59.1 91.7 67.2 REMARK 620 6 HOH B 883 O 158.0 60.8 99.8 65.5 93.3 REMARK 620 7 ASP C 95 OD1 119.5 102.4 76.0 119.1 161.5 75.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 850 O REMARK 620 2 HOH A 854 O 88.1 REMARK 620 3 DUP C 777 O1A 88.5 174.3 REMARK 620 4 DUP C 777 O1B 95.5 96.2 88.7 REMARK 620 5 DUP C 777 O3G 174.0 89.1 93.9 90.1 REMARK 620 6 HOH C 857 O 84.5 90.7 84.4 173.1 90.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP A 777 O1A REMARK 620 2 DUP A 777 O1B 90.2 REMARK 620 3 DUP A 777 O2G 100.2 89.2 REMARK 620 4 HOH B 796 O 172.5 89.3 87.3 REMARK 620 5 HOH B 856 O 89.0 87.8 170.3 83.4 REMARK 620 6 HOH X 888 O 89.9 173.1 97.6 89.7 85.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 778 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP B 777 O2G REMARK 620 2 DUP B 777 O1B 91.2 REMARK 620 3 DUP B 777 O1A 98.3 92.2 REMARK 620 4 HOH B 849 O 93.5 175.2 86.2 REMARK 620 5 HOH C 855 O 88.0 95.3 170.2 85.9 REMARK 620 6 HOH X 874 O 170.5 87.3 91.2 88.2 82.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG X 778 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 95 OD1 REMARK 620 2 HOH X 953 O 97.2 REMARK 620 3 HOH X 960 O 64.7 56.8 REMARK 620 4 HOH X 994 O 64.1 54.5 81.3 REMARK 620 5 ASP Y 95 OD1 125.0 98.0 154.8 83.5 REMARK 620 6 HOH Y 824 O 154.0 56.9 97.7 95.7 63.9 REMARK 620 7 ASP Z 95 OD1 117.7 95.7 73.2 148.8 112.8 70.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG X 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH X 828 O REMARK 620 2 HOH X 990 O 84.7 REMARK 620 3 DUP Z 777 O3G 172.2 87.7 REMARK 620 4 DUP Z 777 O2A 90.3 166.0 96.8 REMARK 620 5 DUP Z 777 O2B 86.6 101.0 96.4 91.7 REMARK 620 6 HOH Z 839 O 85.7 82.1 91.7 84.5 171.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG Y 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP X 777 O1A REMARK 620 2 DUP X 777 O2G 96.8 REMARK 620 3 DUP X 777 O1B 94.0 85.3 REMARK 620 4 HOH X 920 O 176.0 82.8 89.9 REMARK 620 5 HOH X 993 O 85.2 96.3 178.2 91.0 REMARK 620 6 HOH Y 852 O 93.4 169.7 92.3 87.2 86.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG Z 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP Y 777 O2G REMARK 620 2 DUP Y 777 O1A 95.0 REMARK 620 3 DUP Y 777 O1B 88.6 87.2 REMARK 620 4 HOH Y 854 O 92.1 89.3 176.4 REMARK 620 5 HOH Z 779 O 175.8 86.3 87.5 91.9 REMARK 620 6 HOH Z 836 O 88.7 176.2 93.1 90.4 90.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP C 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 778 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG Z 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG X 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG Y 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP B 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP A 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP Y 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP Z 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DUP X 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG X 778 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 778 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HQU RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEX IN WHICH TWO C-TERMINAL ARMS ARE CLOSED AND REMARK 900 ONE ARM HAS OPEN CONFORMATION REMARK 900 RELATED ID: 1Q5H RELATED DB: PDB REMARK 900 HUMAN DUTPASE IN COMPLEX WITH DUDP REMARK 900 RELATED ID: 1Q5U RELATED DB: PDB REMARK 900 HUMAN APO-DUTPASE DBREF 3EHW A 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 DBREF 3EHW B 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 DBREF 3EHW C 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 DBREF 3EHW X 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 DBREF 3EHW Y 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 DBREF 3EHW Z 1 164 UNP Q6FHN1 Q6FHN1_HUMAN 1 164 SEQRES 1 A 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 A 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 A 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 A 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 A 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 A 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 A 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 A 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 A 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 A 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 A 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 A 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 A 164 GLY PHE GLY SER THR GLY LYS ASN SEQRES 1 B 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 B 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 B 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 B 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 B 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 B 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 B 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 B 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 B 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 B 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 B 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 B 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 B 164 GLY PHE GLY SER THR GLY LYS ASN SEQRES 1 C 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 C 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 C 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 C 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 C 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 C 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 C 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 C 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 C 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 C 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 C 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 C 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 C 164 GLY PHE GLY SER THR GLY LYS ASN SEQRES 1 X 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 X 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 X 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 X 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 X 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 X 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 X 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 X 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 X 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 X 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 X 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 X 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 X 164 GLY PHE GLY SER THR GLY LYS ASN SEQRES 1 Y 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 Y 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 Y 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 Y 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 Y 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 Y 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 Y 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 Y 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 Y 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 Y 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 Y 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 Y 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 Y 164 GLY PHE GLY SER THR GLY LYS ASN SEQRES 1 Z 164 MET PRO CYS SER GLU GLU THR PRO ALA ILE SER PRO SER SEQRES 2 Z 164 LYS ARG ALA ARG PRO ALA GLU VAL GLY GLY MET GLN LEU SEQRES 3 Z 164 ARG PHE ALA ARG LEU SER GLU HIS ALA THR ALA PRO THR SEQRES 4 Z 164 ARG GLY SER ALA ARG ALA ALA GLY TYR ASP LEU TYR SER SEQRES 5 Z 164 ALA TYR ASP TYR THR ILE PRO PRO MET GLU LYS ALA VAL SEQRES 6 Z 164 VAL LYS THR ASP ILE GLN ILE ALA LEU PRO SER GLY CYS SEQRES 7 Z 164 TYR GLY ARG VAL ALA PRO ARG SER GLY LEU ALA ALA LYS SEQRES 8 Z 164 HIS PHE ILE ASP VAL GLY ALA GLY VAL ILE ASP GLU ASP SEQRES 9 Z 164 TYR ARG GLY ASN VAL GLY VAL VAL LEU PHE ASN PHE GLY SEQRES 10 Z 164 LYS GLU LYS PHE GLU VAL LYS LYS GLY ASP ARG ILE ALA SEQRES 11 Z 164 GLN LEU ILE CYS GLU ARG ILE PHE TYR PRO GLU ILE GLU SEQRES 12 Z 164 GLU VAL GLN ALA LEU ASP ASP THR GLU ARG GLY SER GLY SEQRES 13 Z 164 GLY PHE GLY SER THR GLY LYS ASN HET MG A 165 1 HET DUP A 777 28 HET MG A 778 1 HET MG B 165 1 HET DUP B 777 28 HET DUP C 777 28 HET MG C 778 1 HET MG X 165 1 HET DUP X 777 28 HET MG X 778 1 HET MG Y 165 1 HET DUP Y 777 28 HET MG Z 165 1 HET DUP Z 777 28 HETNAM MG MAGNESIUM ION HETNAM DUP 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE FORMUL 7 MG 8(MG 2+) FORMUL 8 DUP 6(C9 H16 N3 O13 P3) FORMUL 21 HOH *731(H2 O) HELIX 1 1 ARG A 85 PHE A 93 1 9 HELIX 2 2 ARG B 85 PHE B 93 1 9 HELIX 3 3 ARG C 85 PHE C 93 1 9 HELIX 4 4 ARG X 85 PHE X 93 1 9 HELIX 5 5 ARG Y 85 PHE Y 93 1 9 HELIX 6 6 ARG Z 85 PHE Z 93 1 9 SHEET 1 A 3 ILE A 70 ALA A 73 0 SHEET 2 A 3 LEU A 26 ARG A 30 -1 N ARG A 27 O ALA A 73 SHEET 3 A 3 ILE B 142 GLU B 144 1 O GLU B 143 N LEU A 26 SHEET 1 B 5 THR A 39 ARG A 40 0 SHEET 2 B 5 GLY A 47 TYR A 51 -1 O ASP A 49 N THR A 39 SHEET 3 B 5 ARG A 128 ARG A 136 -1 O ALA A 130 N LEU A 50 SHEET 4 B 5 ARG B 128 PHE B 138 -1 O ARG B 136 N ARG A 136 SHEET 5 B 5 GLY B 47 TYR B 51 -1 N TYR B 48 O LEU B 132 SHEET 1 C 6 VAL A 100 ILE A 101 0 SHEET 2 C 6 CYS A 78 ALA A 83 -1 N GLY A 80 O ILE A 101 SHEET 3 C 6 ARG A 128 ARG A 136 -1 O GLN A 131 N ALA A 83 SHEET 4 C 6 ARG B 128 PHE B 138 -1 O ARG B 136 N ARG A 136 SHEET 5 C 6 CYS B 78 ALA B 83 -1 N ALA B 83 O GLN B 131 SHEET 6 C 6 VAL B 100 ILE B 101 -1 O ILE B 101 N GLY B 80 SHEET 1 D 2 TYR A 56 ILE A 58 0 SHEET 2 D 2 PHE A 121 VAL A 123 -1 O PHE A 121 N ILE A 58 SHEET 1 E 3 GLU A 62 LYS A 67 0 SHEET 2 E 3 GLY A 110 ASN A 115 -1 O VAL A 111 N VAL A 66 SHEET 3 E 3 ILE A 94 GLY A 97 -1 N GLY A 97 O VAL A 112 SHEET 1 F 3 ILE A 142 GLU A 144 0 SHEET 2 F 3 LEU C 26 ARG C 30 1 O LEU C 26 N GLU A 143 SHEET 3 F 3 ILE C 70 ALA C 73 -1 O ALA C 73 N ARG C 27 SHEET 1 G 3 ILE B 70 ALA B 73 0 SHEET 2 G 3 LEU B 26 ARG B 30 -1 N ARG B 27 O ALA B 73 SHEET 3 G 3 ILE C 142 GLU C 144 1 O GLU C 143 N LEU B 26 SHEET 1 H 2 TYR B 56 ILE B 58 0 SHEET 2 H 2 PHE B 121 VAL B 123 -1 O VAL B 123 N TYR B 56 SHEET 1 I 3 GLU B 62 LYS B 67 0 SHEET 2 I 3 GLY B 110 ASN B 115 -1 O VAL B 111 N VAL B 66 SHEET 3 I 3 ILE B 94 GLY B 97 -1 N ASP B 95 O PHE B 114 SHEET 1 J 5 THR C 39 ARG C 40 0 SHEET 2 J 5 GLY C 47 TYR C 51 -1 O ASP C 49 N THR C 39 SHEET 3 J 5 ARG C 128 ARG C 136 -1 O ALA C 130 N LEU C 50 SHEET 4 J 5 CYS C 78 ALA C 83 -1 N ALA C 83 O GLN C 131 SHEET 5 J 5 VAL C 100 ILE C 101 -1 O ILE C 101 N GLY C 80 SHEET 1 K 2 TYR C 56 ILE C 58 0 SHEET 2 K 2 PHE C 121 VAL C 123 -1 O VAL C 123 N TYR C 56 SHEET 1 L 3 GLU C 62 LYS C 67 0 SHEET 2 L 3 GLY C 110 ASN C 115 -1 O VAL C 111 N VAL C 66 SHEET 3 L 3 ILE C 94 GLY C 97 -1 N GLY C 97 O VAL C 112 SHEET 1 M 3 ILE X 70 ALA X 73 0 SHEET 2 M 3 LEU X 26 ARG X 30 -1 N ARG X 27 O ALA X 73 SHEET 3 M 3 ILE Y 142 GLU Y 144 1 O GLU Y 143 N LEU X 26 SHEET 1 N 5 THR X 39 ARG X 40 0 SHEET 2 N 5 GLY X 47 TYR X 51 -1 O ASP X 49 N THR X 39 SHEET 3 N 5 ARG X 128 PHE X 138 -1 O LEU X 132 N TYR X 48 SHEET 4 N 5 CYS X 78 ALA X 83 -1 N ALA X 83 O GLN X 131 SHEET 5 N 5 VAL X 100 ILE X 101 -1 O ILE X 101 N GLY X 80 SHEET 1 O 5 VAL Z 100 ILE Z 101 0 SHEET 2 O 5 CYS Z 78 ALA Z 83 -1 N GLY Z 80 O ILE Z 101 SHEET 3 O 5 ARG Z 128 PHE Z 138 -1 O GLN Z 131 N ALA Z 83 SHEET 4 O 5 GLY Z 47 TYR Z 51 -1 N TYR Z 48 O LEU Z 132 SHEET 5 O 5 THR Z 39 ARG Z 40 -1 N THR Z 39 O ASP Z 49 SHEET 1 P 5 THR Y 39 ARG Y 40 0 SHEET 2 P 5 GLY Y 47 TYR Y 51 -1 O ASP Y 49 N THR Y 39 SHEET 3 P 5 ARG Y 128 ARG Y 136 -1 O LEU Y 132 N TYR Y 48 SHEET 4 P 5 VAL Y 100 ILE Y 101 0 SHEET 5 P 5 CYS Y 78 ALA Y 83 -1 N GLY Y 80 O ILE Y 101 SHEET 1 Q 7 VAL X 100 ILE X 101 0 SHEET 2 Q 7 CYS X 78 ALA X 83 -1 N GLY X 80 O ILE X 101 SHEET 3 Q 7 ARG X 128 PHE X 138 -1 O GLN X 131 N ALA X 83 SHEET 4 Q 7 ARG Z 128 PHE Z 138 -1 O ARG Z 136 N ARG X 136 SHEET 5 Q 7 ARG Y 128 ARG Y 136 -1 N ARG Y 136 O ARG Z 136 SHEET 6 Q 7 GLY Y 47 TYR Y 51 -1 N TYR Y 48 O LEU Y 132 SHEET 7 Q 7 THR Y 39 ARG Y 40 -1 N THR Y 39 O ASP Y 49 SHEET 1 R 2 TYR X 56 ILE X 58 0 SHEET 2 R 2 PHE X 121 VAL X 123 -1 O VAL X 123 N TYR X 56 SHEET 1 S 3 GLU X 62 LYS X 67 0 SHEET 2 S 3 GLY X 110 ASN X 115 -1 O VAL X 111 N VAL X 66 SHEET 3 S 3 ILE X 94 GLY X 97 -1 N ASP X 95 O PHE X 114 SHEET 1 T 3 ILE X 142 GLU X 144 0 SHEET 2 T 3 LEU Z 26 ARG Z 30 1 O LEU Z 26 N GLU X 143 SHEET 3 T 3 ILE Z 70 ALA Z 73 -1 O ALA Z 73 N ARG Z 27 SHEET 1 U 3 ILE Y 70 ALA Y 73 0 SHEET 2 U 3 LEU Y 26 ARG Y 30 -1 N ARG Y 27 O ALA Y 73 SHEET 3 U 3 ILE Z 142 GLU Z 144 1 O GLU Z 143 N LEU Y 26 SHEET 1 V 2 TYR Y 56 ILE Y 58 0 SHEET 2 V 2 PHE Y 121 VAL Y 123 -1 O VAL Y 123 N TYR Y 56 SHEET 1 W 3 GLU Y 62 LYS Y 67 0 SHEET 2 W 3 GLY Y 110 ASN Y 115 -1 O VAL Y 111 N VAL Y 66 SHEET 3 W 3 ILE Y 94 GLY Y 97 -1 N GLY Y 97 O VAL Y 112 SHEET 1 X 2 TYR Z 56 ILE Z 58 0 SHEET 2 X 2 PHE Z 121 VAL Z 123 -1 O PHE Z 121 N ILE Z 58 SHEET 1 Y 3 GLU Z 62 LYS Z 67 0 SHEET 2 Y 3 GLY Z 110 ASN Z 115 -1 O VAL Z 111 N VAL Z 66 SHEET 3 Y 3 ILE Z 94 GLY Z 97 -1 N GLY Z 97 O VAL Z 112 SSBOND 1 CYS Z 78 CYS Z 134 1555 1555 2.93 LINK OD1 ASP A 95 MG MG A 778 1555 1555 2.49 LINK MG MG A 165 O HOH A 850 1555 1555 2.17 LINK MG MG A 165 O HOH A 854 1555 1555 2.09 LINK MG MG A 165 O1A DUP C 777 1555 1555 2.08 LINK MG MG A 165 O1B DUP C 777 1555 1555 2.03 LINK MG MG A 165 O3G DUP C 777 1555 1555 2.16 LINK MG MG A 165 O HOH C 857 1555 1555 2.01 LINK O1A DUP A 777 MG MG B 165 1555 1555 2.01 LINK O1B DUP A 777 MG MG B 165 1555 1555 2.06 LINK O2G DUP A 777 MG MG B 165 1555 1555 2.04 LINK MG MG A 778 O HOH A 839 1555 1555 2.75 LINK MG MG A 778 O HOH A 852 1555 1555 2.62 LINK MG MG A 778 OD1 ASP B 95 1555 1555 2.59 LINK MG MG A 778 O HOH B 803 1555 1555 2.48 LINK MG MG A 778 O HOH B 883 1555 1555 2.36 LINK MG MG A 778 OD1 ASP C 95 1555 1555 2.57 LINK MG MG B 165 O HOH B 796 1555 1555 2.19 LINK MG MG B 165 O HOH B 856 1555 1555 2.10 LINK MG MG B 165 O HOH X 888 1555 1555 2.20 LINK O2G DUP B 777 MG MG C 778 1555 1555 2.08 LINK O1B DUP B 777 MG MG C 778 1555 1555 2.02 LINK O1A DUP B 777 MG MG C 778 1555 1555 1.98 LINK O HOH B 849 MG MG C 778 1555 1555 2.04 LINK MG MG C 778 O HOH C 855 1555 1555 2.09 LINK MG MG C 778 O HOH X 874 1555 1555 2.14 LINK OD1 ASP X 95 MG MG X 778 1555 1555 2.55 LINK MG MG X 165 O HOH X 828 1555 1555 2.16 LINK MG MG X 165 O HOH X 990 1555 1555 2.07 LINK MG MG X 165 O3G DUP Z 777 1555 1555 2.16 LINK MG MG X 165 O2A DUP Z 777 1555 1555 2.01 LINK MG MG X 165 O2B DUP Z 777 1555 1555 2.08 LINK MG MG X 165 O HOH Z 839 1555 1555 2.16 LINK O1A DUP X 777 MG MG Y 165 1555 1555 1.97 LINK O2G DUP X 777 MG MG Y 165 1555 1555 2.10 LINK O1B DUP X 777 MG MG Y 165 1555 1555 2.05 LINK MG MG X 778 O HOH X 953 1555 1555 2.84 LINK MG MG X 778 O HOH X 960 1555 1555 2.60 LINK MG MG X 778 O HOH X 994 1555 1555 2.51 LINK MG MG X 778 OD1 ASP Y 95 1555 1555 2.48 LINK MG MG X 778 O HOH Y 824 1555 1555 2.54 LINK MG MG X 778 OD1 ASP Z 95 1555 1555 2.64 LINK O HOH X 920 MG MG Y 165 1555 1555 2.18 LINK O HOH X 993 MG MG Y 165 1555 1555 2.21 LINK MG MG Y 165 O HOH Y 852 1555 1555 2.09 LINK O2G DUP Y 777 MG MG Z 165 1555 1555 2.10 LINK O1A DUP Y 777 MG MG Z 165 1555 1555 1.97 LINK O1B DUP Y 777 MG MG Z 165 1555 1555 2.03 LINK O HOH Y 854 MG MG Z 165 1555 1555 2.08 LINK MG MG Z 165 O HOH Z 779 1555 1555 2.09 LINK MG MG Z 165 O HOH Z 836 1555 1555 2.17 SITE 1 AC1 25 ARG A 85 SER A 86 GLY A 87 GLN A 131 SITE 2 AC1 25 MG A 165 HOH A 850 HOH A 854 ALA B 98 SITE 3 AC1 25 GLY B 99 VAL B 100 ILE B 101 ASP B 102 SITE 4 AC1 25 TYR B 105 GLY B 110 HOH B 778 ARG C 153 SITE 5 AC1 25 GLY C 157 PHE C 158 GLY C 159 SER C 160 SITE 6 AC1 25 THR C 161 HOH C 780 HOH C 857 HOH X 790 SITE 7 AC1 25 HOH X 856 SITE 1 AC2 4 HOH A 850 HOH A 854 DUP C 777 HOH C 857 SITE 1 AC3 4 DUP B 777 HOH B 849 HOH C 855 HOH X 874 SITE 1 AC4 4 DUP A 777 HOH B 796 HOH B 856 HOH X 888 SITE 1 AC5 4 DUP Y 777 HOH Y 854 HOH Z 779 HOH Z 836 SITE 1 AC6 4 HOH X 828 HOH X 990 DUP Z 777 HOH Z 839 SITE 1 AC7 4 DUP X 777 HOH X 920 HOH X 993 HOH Y 852 SITE 1 AC8 25 ALA A 98 GLY A 99 VAL A 100 ILE A 101 SITE 2 AC8 25 ASP A 102 TYR A 105 GLY A 110 HOH A 779 SITE 3 AC8 25 ARG B 153 GLY B 157 PHE B 158 GLY B 159 SITE 4 AC8 25 SER B 160 THR B 161 HOH B 779 HOH B 780 SITE 5 AC8 25 HOH B 849 ARG C 85 SER C 86 GLY C 87 SITE 6 AC8 25 GLN C 131 MG C 778 HOH C 855 HOH X 784 SITE 7 AC8 25 HOH X 874 SITE 1 AC9 25 ARG A 153 GLY A 157 PHE A 158 GLY A 159 SITE 2 AC9 25 SER A 160 THR A 161 HOH A 783 ARG B 85 SITE 3 AC9 25 SER B 86 GLY B 87 GLN B 131 MG B 165 SITE 4 AC9 25 HOH B 796 HOH B 856 ALA C 98 GLY C 99 SITE 5 AC9 25 VAL C 100 ILE C 101 ASP C 102 TYR C 105 SITE 6 AC9 25 GLY C 110 HOH X 786 HOH X 799 HOH X 800 SITE 7 AC9 25 HOH X 888 SITE 1 BC1 26 ALA X 98 GLY X 99 VAL X 100 ILE X 101 SITE 2 BC1 26 ASP X 102 TYR X 105 ASN X 108 GLY X 110 SITE 3 BC1 26 HOH X 796 HOH X 849 HOH X 868 ARG Y 153 SITE 4 BC1 26 GLY Y 157 PHE Y 158 GLY Y 159 SER Y 160 SITE 5 BC1 26 THR Y 161 HOH Y 780 HOH Y 854 ARG Z 85 SITE 6 BC1 26 SER Z 86 GLY Z 87 GLN Z 131 MG Z 165 SITE 7 BC1 26 HOH Z 779 HOH Z 836 SITE 1 BC2 25 ARG X 85 SER X 86 GLY X 87 GLN X 131 SITE 2 BC2 25 MG X 165 HOH X 788 HOH X 828 HOH X 990 SITE 3 BC2 25 ALA Y 98 GLY Y 99 VAL Y 100 ILE Y 101 SITE 4 BC2 25 ASP Y 102 TYR Y 105 GLY Y 110 HOH Y 778 SITE 5 BC2 25 ARG Z 153 GLY Z 157 PHE Z 158 GLY Z 159 SITE 6 BC2 25 SER Z 160 THR Z 161 HOH Z 781 HOH Z 782 SITE 7 BC2 25 HOH Z 839 SITE 1 BC3 25 ARG X 153 GLY X 157 PHE X 158 GLY X 159 SITE 2 BC3 25 SER X 160 THR X 161 HOH X 779 HOH X 783 SITE 3 BC3 25 HOH X 831 HOH X 920 HOH X 993 ARG Y 85 SITE 4 BC3 25 SER Y 86 GLY Y 87 GLN Y 131 MG Y 165 SITE 5 BC3 25 HOH Y 852 ALA Z 98 GLY Z 99 VAL Z 100 SITE 6 BC3 25 ILE Z 101 ASP Z 102 TYR Z 105 GLY Z 110 SITE 7 BC3 25 HOH Z 778 SITE 1 BC4 7 ASP X 95 HOH X 953 HOH X 960 HOH X 994 SITE 2 BC4 7 ASP Y 95 HOH Y 824 ASP Z 95 SITE 1 BC5 7 ASP A 95 HOH A 839 HOH A 852 ASP B 95 SITE 2 BC5 7 HOH B 803 HOH B 883 ASP C 95 CRYST1 65.446 87.160 70.608 90.00 90.09 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015280 0.000000 0.000023 0.00000 SCALE2 0.000000 0.011473 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014163 0.00000