1CS9 Dna Binding Protein date Aug 18, 1999
title Solution Structure Of Cggirgera In Contact With The Monoclonal Antibody Mab 4x11, Nmr, 7 Structures
authors A.Phan Chan Du, M.C.Petit, G.Guichard, J.P.Briand, S.Muller, M.T.Cung
compound source
Molecule: Histone H3 Peptide
Chain: A
Fragment: C-Terminal Region 130-135
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Peptide Corresponds To The Irgera Sequence Present In The C-Terminal Region 130-135 Of Histone H3 Bound To The Mab 4x11 Monoclonal Antibody (Igg1). The Sequence Cgg Was Added To The N- Terminus Of The Irgera Sequence As A Linker To The Dextran Matrix In Biacore Experiments Via The Cys Thiol Group.
methodSolution NMR
Primary referenceStructure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach., Phan-Chan-Du A, Petit MC, Guichard G, Briand JP, Muller S, Cung MT, Biochemistry 2001 May 15;40(19):5720-7. PMID:11341837
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1CS9
  • Retrieve 1CS9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CS9 from S2C, [Save to disk]
  • View 1CS9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CS9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CS9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cs9a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1cs9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cs9] [1cs9_A]
  • SWISS-PROT database: [P68431]
  • Domain organization of [H31_HUMAN] by SWISSPFAM
  • Other resources with information on 1CS9
  • Community annotation for 1CS9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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