1E1V Protein Kinase date May 11, 2000
title Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
authors J.A.Endicott, M.E.M.Noble, L.N.Johnson
compound source
Molecule: Cyclin-Dependent Protein Kinase 2
Chain: A
Synonym: Cdk2
Ec: 2.7.1.37
Engineered: Yes
Other_details: Complex With Cyclin A Or Cyclin E
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.195 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.620 71.050 71.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand ACE, CMG BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1OIR, 1PXI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification of novel purine and pyrimidine cyclin-dependent kinase inhibitors with distinct molecular interactions and tumor cell growth inhibition profiles., Arris CE, Boyle FT, Calvert AH, Curtin NJ, Endicott JA, Garman EF, Gibson AE, Golding BT, Grant S, Griffin RJ, Jewsbury P, Johnson LN, Lawrie AM, Newell DR, Noble ME, Sausville EA, Schultz R, Yu W, J Med Chem 2000 Jul 27;43(15):2797-804. PMID:10956187
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1e1v.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 1E1V
  • CSU: Contacts of Structural Units for 1E1V
  • Likely Quarternary Molecular Structure file(s) for 1E1V
  • Retrieve 1E1V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E1V from S2C, [Save to disk]
  • View 1E1V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E1V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E1V, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e1va_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1e1v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e1v] [1e1v_A]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 1E1V: [S_TKc ] by SMART
  • Other resources with information on 1E1V
  • Community annotation for 1E1V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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