1IER Iron Storage date May 28, 1996
title Cubic Crystal Structure Of Native Horse Spleen Ferritin
authors T.Granier, B.Gallois, A.Dautant, B.Langlois D'Estaintot, G.Preci
compound source
Molecule: Ferritin
Chain: A
Fragment: L-Chain
Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Spleen
Tissue: Spleen
symmetry Space Group: F 4 3 2
R_factor 0.187 R_Free NULL
length a length b length c angle alpha angle beta angle gamma
182.900 182.900 182.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand CD enzyme
related structures by homologous chain: 1DAT, 1IES

Primary referenceComparison of the structures of the cubic and tetragonal forms of horse-spleen apoferritin., Granier T, Gallois B, Dautant A, Langlois d'Estaintot B, Precigoux G, Acta Crystallogr D Biol Crystallogr. 1997 Sep 1;53(Pt 5):580-7. PMID:15299889
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (1ier.pdb1.gz) 722 Kb
  • LPC: Ligand-Protein Contacts for 1IER
  • CSU: Contacts of Structural Units for 1IER
  • Likely Quarternary Molecular Structure file(s) for 1IER
  • Retrieve 1IER in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IER from S2C, [Save to disk]
  • View 1IER in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IER
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IER, from MSDmotif at EBI
  • Genome occurence of 1IER's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ier__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1ier from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ier_A] [1ier]
  • SWISS-PROT database: [P02791]
  • Domain organization of [FRIL_HORSE] by SWISSPFAM
  • Other resources with information on 1IER
  • Community annotation for 1IER at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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