3BIZ Transferase date Dec 02, 2007
title Wee1 Kinase Complex With Inhibitor Pd331618
authors C.J.Squire, J.M.Dickson, I.Ivanovic, E.N.Baker
compound source
Molecule: Wee1-Like Protein Kinase
Chain: A
Fragment: Kinase Domain
Synonym: Wee1a Kinase, Wee1hu
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Wee1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_vector: Dh10bac
symmetry Space Group: P 41 21 2
R_factor 0.189 R_Free 0.247
length a length b length c angle alpha angle beta angle gamma
68.859 68.859 156.238 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 61E, CL BindingDB enzyme Transferase E.C. BRENDA

Primary referenceSynthesis and structure-activity relationships of soluble 8-substituted 4-(2-chlorophenyl)-9-hydroxypyrrolo[3,4-c]carbazole-1,3(2H,6H)-diones as inhibitors of the Wee1 and Chk1 checkpoint kinases., Smaill JB, Lee HH, Palmer BD, Thompson AM, Squire CJ, Baker EN, Booth RJ, Kraker A, Hook K, Denny WA, Bioorg Med Chem Lett. 2008 Feb 1;18(3):929-33. Epub 2008 Jan 11. PMID:18191399
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (3biz.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3BIZ
  • CSU: Contacts of Structural Units for 3BIZ
  • Likely Quarternary Molecular Structure file(s) for 3BIZ
  • Structure Factors (286 Kb)
  • Retrieve 3BIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BIZ from S2C, [Save to disk]
  • Re-refined 3biz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BIZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3BIZ, from MSDmotif at EBI
  • Fold representative 3biz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3biz] [3biz_A]
  • SWISS-PROT database: [P30291]
  • Domain organization of [WEE1_HUMAN] by SWISSPFAM
  • Domain found in 3BIZ: [STYKc ] by SMART
  • Other resources with information on 3BIZ
  • Community annotation for 3BIZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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