3CRD Caspase Recruitment Domain date Jul 24, 1998
title Nmr Structure Of The Raidd Card Domain, 15 Structures
authors J.J.Chou, H.Matsuo, H.Duan, G.Wagner
compound source
Molecule: Raidd
Chain: A
Fragment: Card Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet23b
Other_details: Hhhhhh Histidine Tag Was Added At The C- Terminus For Ease Of Purification
methodSolution NMR

Primary referenceSolution structure of the RAIDD CARD and model for CARD/CARD interaction in caspase-2 and caspase-9 recruitment., Chou JJ, Matsuo H, Duan H, Wagner G, Cell 1998 Jul 24;94(2):171-80. PMID:9695946
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (417 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 3CRD
  • Retrieve 3CRD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CRD from S2C, [Save to disk]
  • View 3CRD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CRD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3CRD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3crd__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 3crd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3crd_A] [3crd]
  • SWISS-PROT database: [P78560]
  • Domain organization of [CRADD_HUMAN] by SWISSPFAM
  • Domain found in 3CRD: [CARD ] by SMART
  • Other resources with information on 3CRD
  • Community annotation for 3CRD at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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