1AJJ	Receptor	date	May 04, 1997
title	Ldl Receptor Ligand-Binding Module 5, Calcium-Coordinating
authors	D.Fass, S.C.Blacklow, P.S.Kim, J.M.Berger
compound		source
Molecule: Low-Density Lipoprotein Receptor Chain: A Fragment: Ligand-Binding Domain, Fifth Repeat Synonym: Lr5 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_plasmid: Pmm-Lr5
symmetry	Space Group: H 3	R_factor 0.209 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.450 53.450 26.760 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	CA, SO4	enzyme
Primary reference	Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module., Fass D, Blacklow S, Kim PS, Berger JM, Nature 1997 Aug 14;388(6643):691-3. PMID:9262405

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk] Biological Unit Coordinates (1ajj.pdb1.gz) 7 Kb LPC: Ligand-Protein Contacts for 1AJJ CSU: Contacts of Structural Units for 1AJJ Likely Quarternary Molecular Structure file(s) for 1AJJ Retrieve 1AJJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AJJ from S2C, [Save to disk]

View 1AJJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AJJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AJJ, from MSDmotif at EBI Genome occurence of 1AJJ's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ajj__, region [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ajj] [1ajj_A] SWISS-PROT database: [P01130] Domain organization of [LDLR_HUMAN] by SWISSPFAM Domain found in 1AJJ: [LDLa ] by SMART

Other resources with information on 1AJJ

Community annotation for 1AJJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---