1BO0 Signaling Protein date Aug 10, 1998
title Monocyte Chemoattractant Protein-3, Nmr, Minimized Average Structure
authors D.Kwon, D.Lee, B.D.Sykes, K.S.Kim
compound source
Molecule: Protein (Monocyte Chemoattractant Protein-3)
Chain: A
Synonym: Mcp-3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pet15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • CCR1 chemokine receptor bind...


  • Primary referenceStructural characterization of a monomeric chemokine: monocyte chemoattractant protein-3., Kim KS, Rajarathnam K, Clark-Lewis I, Sykes BD, FEBS Lett 1996 Oct 21;395(2-3):277-82. PMID:8898111
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1BO0
  • Original NMR restraints for 1BO0 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1BO0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BO0 from S2C, [Save to disk]
  • View 1BO0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BO0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BO0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bo0__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1bo0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bo0_A] [1bo0]
  • SWISS-PROT database: [P80098]
  • Domain organization of [CCL7_HUMAN] by SWISSPFAM
  • Domain found in 1BO0: [SCY ] by SMART
  • Other resources with information on 1BO0
  • Community annotation for 1BO0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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