1BQI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SBA enzyme
related structures by homologous chain: 1STF, 6PAD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUse of papain as a model for the structure-based design of cathepsin K inhibitors: crystal structures of two papain-inhibitor complexes demonstrate binding to S'-subsites., LaLonde JM, Zhao B, Smith WW, Janson CA, DesJarlais RL, Tomaszek TA, Carr TJ, Thompson SK, Oh HJ, Yamashita DS, Veber DF, Abdel-Meguid SS, J Med Chem 1998 Nov 5;41(23):4567-76. PMID:9804696
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1bqi.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 1BQI
  • CSU: Contacts of Structural Units for 1BQI
  • Likely Quarternary Molecular Structure file(s) for 1BQI
  • Retrieve 1BQI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BQI from S2C, [Save to disk]
  • View 1BQI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bqi] [1bqi_A]
  • SWISS-PROT database: [P00784]
  • Domain found in 1BQI: [Pept_C1 ] by SMART

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