1C5Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ESP, FLC BindingDB enzyme
related structures by homologous chain: 1GJ8, 1O5A
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceStructural basis for selectivity of a small molecule, S1-binding, submicromolar inhibitor of urokinase-type plasminogen activator., Katz BA, Mackman R, Luong C, Radika K, Martelli A, Sprengeler PA, Wang J, Chan H, Wong L, Chem Biol 2000 Apr;7(4):299-312. PMID:10779411
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (1c5y.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 1C5Y
  • CSU: Contacts of Structural Units for 1C5Y
  • Likely Quarternary Molecular Structure file(s) for 1C5Y
  • Structure Factors (131 Kb)
  • Retrieve 1C5Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1C5Y from S2C, [Save to disk]
  • Re-refined 1c5y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1C5Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1c5y] [1c5y_A] [1c5y_B]
  • SWISS-PROT database: [P00749]
  • Domain found in 1C5Y: [Tryp_SPc ] by SMART

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