1CB2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MAN, NAG enzyme
related structures by homologous chain: 1QK0, 1QK2
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceThe active site of Trichoderma reesei cellobiohydrolase II: the role of tyrosine 169., Koivula A, Reinikainen T, Ruohonen L, Valkeajarvi A, Claeyssens M, Teleman O, Kleywegt GJ, Szardenings M, Rouvinen J, Jones TA, Teeri TT, Protein Eng 1996 Aug;9(8):691-9. PMID:8875646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (1cb2.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (1cb2.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1CB2
  • CSU: Contacts of Structural Units for 1CB2
  • Likely Quarternary Molecular Structure file(s) for 1CB2
  • Structure Factors (348 Kb)
  • Retrieve 1CB2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CB2 from S2C, [Save to disk]
  • Re-refined 1cb2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CB2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CB2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CB2, from MSDmotif at EBI
  • Genome occurence of 1CB2's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cb2a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cb2b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1i1cb2, region B:342-443 [Jmol] [rasmolscript] [script source]
        - Domain d1e1cb2, region B:476-638 [Jmol] [rasmolscript] [script source]
  • Fold representative 1cb2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cb2] [1cb2_A] [1cb2_B]
  • SWISS-PROT database: [P07987]
  • Domain organization of [GUX2_TRIRE] by SWISSPFAM
  • Other resources with information on 1CB2
  • Community annotation for 1CB2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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