1CT6 Dna Binding Protein date Aug 19, 1999
title Solution Structure Of Cggirgerg In Contact With The Monoclonal Antibody Mab 4x11, Nmr, 11 Structures
authors A.Phan Chan Du, M.C.Petit, G.Guichard, J.P.Briand, S.Muller, M.T.Cung
compound source
Molecule: Histone H3 Peptide
Chain: A
Fragment: C-Terminal Region 130-135
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Peptide Corresponds To The Irgera Sequence Present In Thec- Terminal Region 130-135 Of Histone H3 Bound To The Mab4x11 Monoclonal Antibody (Igg1). The Sequence Cgg Was Added To The N- Terminus Of The Irgera Sequence As A Linker To The Dextran Matrix In Biacore Experiments Via The Cys Thiol Group. Ala Was Replaced By Gly.
methodSolution NMR
Primary referenceStructure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach., Phan-Chan-Du A, Petit MC, Guichard G, Briand JP, Muller S, Cung MT, Biochemistry 2001 May 15;40(19):5720-7. PMID:11341837
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1CT6
  • Retrieve 1CT6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CT6 from S2C, [Save to disk]
  • View 1CT6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CT6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CT6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ct6a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ct6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ct6_A] [1ct6]
  • SWISS-PROT database: [P68431]
  • Domain organization of [H31_HUMAN] by SWISSPFAM
  • Other resources with information on 1CT6
  • Community annotation for 1CT6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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